Query= MSMg01no337_l13.b1 MSMg01no337_l13.b1 CHROMAT_FILE:
MSMg01no337_l13.b1 PHD_FILE: MSMg01no337_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:11 2005
(362 letters)
>mm_chr15_81584471_81585233
Length = 763
Score = 584 bits (302), Expect = e-171
Identities = 341/354 (96%), Gaps = 3/354 (0%)
Strand = Plus / Minus
Query: 8 ttcagtgatctctccagtgggcgtggggttgctttacccataggacactgtccttcctta 67
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ttcagtgatctctacagtgggcgtggggttgctttacccataggacactgtccttcctta 369
Query: 68 cttccctacactttattgtctgtgtctg-aggaaggcgttagaagttccctatctcccat 126
|||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 368 cttccctacactttcgtgtctgtgtctgaaggaaggcgttagaagttccctatctcccat 309
Query: 127 tattagcccatgtataaacggtttgtcctaatctctccaatggacattcgaggaaactgc 186
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tactagcccatgtataaaccgtttgtcctaatctctccaatggacattcgaggaaactgc 249
Query: 187 ccctatggtgtttttaattggataggtaagctctttttcaccaggtaagcattaaggtta 246
|||||||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||
Sbjct: 248 ccctatggtgtttttaattgaatagttaagctctttttcactaggcgagcattaaggtta 189
Query: 247 gggttatggatagcctcagtgttagggttac-tgttaatggtaaaagtaggggtagagct 305
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 188 gggttatggatagcctcagtgttagggttacat-ttaatggtaaaagtaggggtagagct 130
Query: 306 agggtcagtgttagggctgggggtggaactggggttgggttaggggtgttggtt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 agggtcagtgttagggctgggggtggaactggggttgggttaggggtgttggtt 76
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 763
Length adjustment: 9
Effective length of query: 353
Effective length of database: 754
Effective search space: 266162
Effective search space used: 266162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_l13.g1 MSMg01no337_l13.g1 CHROMAT_FILE:
MSMg01no337_l13.g1 PHD_FILE: MSMg01no337_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:11 2005
(444 letters)
>mm_chr15_81459129_81459972
Length = 844
Score = 812 bits (420), Expect = 0.0
Identities = 438/444 (98%)
Strand = Plus / Plus
Query: 1 aaggctagccttgtttactacttagcaaattccagataaagctgaggttgacagtgagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggctagccttgtttactacttagcaaattccagataaagctgaggttgacagtgagac 260
Query: 61 cctgtcttatagctgagcattggtggtacccttgtaatttgacaactggtgaagtagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgtcttatagctgagcattggtggtacccttgtaatttgacaactggtgaagtagaga 320
Query: 121 caggaggatccctggaacttgctggttggtgagtctaggccctaacactactaagactcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggaggatccctggaacttgctggttggtgagtctaggccctaacactactaagactcc 380
Query: 181 aatttggcaggtgttggggatagaggatggagagaggtaagggggcttaactgcttttac 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 aatttggcaggtgttggggatagaggatggagagaggtaagagggcttaactgcttttac 440
Query: 241 agaggatgtttactggactcgaagcagctacctggaactccaattccagggaccaaacac 300
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 agaggatgcagactggactcgaagcagctccctggaactccaattccagggaccaaacac 500
Query: 301 ccacttttgtcgtcaggctttagtacataaattcacacaaacctacaaatacataaaatg 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 ccacttttgtcgtcaggctttagtacataaattcacacaaacctagaaatacataaaatg 560
Query: 361 aagtattaaatgtggaaaacaagattatttacctgaatggaaacactcatctaatgttga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagtattaaatgtggaaaacaagattatttacctgaatggaaacactcatctaatgttga 620
Query: 421 cccttcgtctacaaacagagagac 444
||||||||||||||||||||||||
Sbjct: 621 cccttcgtctacaaacagagagac 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
