Query= MSMg01no338_g13.b1 MSMg01no338_g13.b1 CHROMAT_FILE:
MSMg01no338_g13.b1 PHD_FILE: MSMg01no338_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:02 2005
(645 letters)
>mm_chr15_21616740_21617784
Length = 1045
Score = 1149 bits (594), Expect = 0.0
Identities = 628/646 (97%), Gaps = 13/646 (2%)
Strand = Plus / Minus
Query: 1 cacttttt-atccatgctgttctaggatcacagagatccactttcctctccctcccaagt 59
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cactttttaaaccatgctgttctaggatcacagagatccactttcctctccctcccaagt 673
Query: 60 gtggagattaaagacttgtctccatgcctggtataggaaacctgattttaagtgtgtttt 119
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 672 gtggagattaaagacttgtctccatgcctggtataagaaacctgattttaagtgtgtttt 613
Query: 120 catttaacagaaaagcagatatccaaagtctggtttctgttcaccaggaaacaacttaaa 179
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 catttaacagaaaagcaaatatccaaagtctggtttctgttcaccaggaaacaacttaaa 553
Query: 180 cttcccacaaaagcgaatacctcaagatcacctagtttctattcaatccaaatgcctgtg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cttcccacaaaagcgaatacctcaagatcacctagtttctattcaatccaaatgcctgtg 493
Query: 240 tcaactcaaaggtcccattcctatggcctatgatgccatttttctcttcccttagccctt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tcaactcaaaggtcccattcctatggcctatgatgccatttttctcttcccttagccctt 433
Query: 300 cccctgcatttacccttagcagtttgattcccaacagaccattcttcctaaacaaggagc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cccctgcatttacccttagcagtttgattcccaacagaccattcttcctaaacaaggagc 373
Query: 360 tgatggatcggtgtgctacttgtgcccctgcttacatgaggaagttctaaaatcattctt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgatggatcggtgtgctacttgtgcccctgcttacatgaggaagttctaaaatcattctt 313
Query: 420 tacatgtgtagcagtcctgtcctgttggtttgtttgtctgctttatttgtttgtttgttt 479
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 312 tacatgtgtagcagtcctgtcctgttggtttgtttgtctgcttt----gtttgtttgttt 257
Query: 480 gtttgtttgtttgttttgtgtgtgtgtaccagatttcctttattctatatgaaaggcaca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gtttgtttgtttgttttgtgtgtgtgtaccagatttcctttattctatatgaaaggcaca 197
Query: 540 ttctttttaaagaacatatttcattcattcattcattcattcattcattattaatttatt 599
||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 196 ttctttttaaagaacatatttcattcattcattcattcattcatt--------atttatt 145
Query: 600 tatttattcatttatttatttatacttatttactatacatcccact 645
|||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 144 tattcatttatttatttatttatacttatttactatacatcccact 99
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_g13.g1 MSMg01no338_g13.g1 CHROMAT_FILE:
MSMg01no338_g13.g1 PHD_FILE: MSMg01no338_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:02 2005
(620 letters)
>mm_chr15_21441131_21442151
Length = 1021
Score = 1139 bits (589), Expect = 0.0
Identities = 613/621 (98%), Gaps = 1/621 (0%)
Strand = Plus / Plus
Query: 1 atttta-aaaaatataacagtatgtttaaacagaaaggtgtgtacggataagtaactaag 59
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttacaaaaatataacagtatgtttaaacagaaaggtgtgtacggataagtaactaag 260
Query: 60 aatataaaagaatttctattgtaaagacaaagagaaatgtataagaactggaatcttatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatataaaagaatttctattgtaaagacaaagagaaatgtataagaactggaatcttatt 320
Query: 120 taggaattgggaaatagtttatgattctcaacatgattccatatgagtatcttgagtctt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggaattgggaaatagtttatgattctcaacatgattccatatgagtatcttgagtctt 380
Query: 180 cgtgtcacaacctcaatggagaggaattctaagataagtctgctaacatattacagtgtt 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtgccacaacctcaatggagaggaattctaagataagtctgctaacatattacagtgtt 440
Query: 240 tataaatttctagtatttaatgactaaaaacagaaatgatgatcatctcaactggttttt 299
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 tataaatttctagtatttaatgactagaaacagaaatgatgatcatctcaactggttttt 500
Query: 300 gaattaaagtgcacaaaacaataaaaatattatgataaatcaaattggatagctcaatga 359
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 gaattaaagtgcacaaaacaataaaaatattatggtaaatcaaattggatagctcaatga 560
Query: 360 tattatagtgagacgtatatttcatggccagatgaaatttcagaaattataataaaaatg 419
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 tattatagtgagacatatatttcatggccagataaaatttcagaaattataataaaaatg 620
Query: 420 ccagattgtgtttataacttggagccatcagtcaaacctagtattgtatggttattaaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccagattgtgtttataacttggagccatcagtcaaacctagtattgtatggttattaaaa 680
Query: 480 tactattttatacagtgttgggtggaggaaaagttttgtccagagtaattctttggagag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tactattttatacagtgttgggtggaggaaaagttttgtccagagtaattctttggagag 740
Query: 540 agtgaagtagcatttttaacttagaaaggaagtgggtaattgcctttccctcactaggtt 599
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 agtgaagcagcatttttaacttagaaaggaagtgggtaattgccttttcctcactaggtt 800
Query: 600 tggtaagcagagctttctgct 620
|||||||||||||||||||||
Sbjct: 801 tggtaagcagagctttctgct 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1021
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1011
Effective search space: 616710
Effective search space used: 616710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
