Query= MSMg01no338_o24.b1 MSMg01no338_o24.b1 CHROMAT_FILE:
MSMg01no338_o24.b1 PHD_FILE: MSMg01no338_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:40 2005
(545 letters)
>mm_chr15_54909436_54910380
Length = 945
Score = 932 bits (482), Expect = 0.0
Identities = 527/542 (97%), Gaps = 2/542 (0%)
Strand = Plus / Minus
Query: 5 gaattcagcccaagtctggcctgtcactatacctcatgaaacctttctacccttctacct 64
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 928 gaattcagcccaagcctggcctgtcactatacctcatgaaacctttttacccttctacct 869
Query: 65 ttatcaagtcttttctcttcagataccacttacatcccattttgtcttcactcccagatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ttatcaagtcttttctcttcagataccacttacatcccattttgtcttcactcccagatg 809
Query: 125 atgatctcattccttgaggaaacggaagcagctaaacgggaaccacctcctttcccattg 184
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 808 atgatctcattccttgaggaaacagaagcagctaaaggggaaccacctcctttcccattg 749
Query: 185 ccaagccttcaaccccctcatgtctgcactttttcctttcgggctcccctgtacagtata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ccaagccttcaaccccctcatgtctgcactttttcctttcgggctcccctgtacagtata 689
Query: 245 taagctctacctcctcttcttgtcttcggtgtgtttctatttatctgtgtgagtgagttt 304
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 688 taagctctacctcctctttttgtcttcagtgtgtttgtatttatctgtgtgagtgagttt 629
Query: 305 gggttcacgtgtgagggtgaggatgctcatgcacaggagaaccagatgtcttcctccatc 364
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 628 gggttcacgtgtgagggtgaggatgctcatgcacaggggaaccagatgtcttcctcaatc 569
Query: 365 actctgcctgtttccctaaggcggagccctttcga-aaacctgggacttgtcatggctag 423
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 568 actctgcctgtttccctaaggcggagccctttc-acaaacctgggacttgtcatggctag 510
Query: 424 gtttgaagctagcaagtgttatggagtttgtgacccctggaaaaagaccatagactcaat 483
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 509 gtttgaagctagcaagtgttatggagtttgtgacccctgggaaaagaccatggactcaat 450
Query: 484 ctaattataattacaagatttattgattagctgctcggaggacaaacaatttctgagcca 543
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 449 ctaattataattacaagatttattgattagctgcttggaggacaaataatttctgagcca 390
Query: 544 ac 545
||
Sbjct: 389 ac 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_o24.g1 MSMg01no338_o24.g1 CHROMAT_FILE:
MSMg01no338_o24.g1 PHD_FILE: MSMg01no338_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:40 2005
(329 letters)
>mm_chr15_54736314_54737042
Length = 729
Score = 590 bits (305), Expect = e-173
Identities = 324/333 (97%), Gaps = 5/333 (1%)
Strand = Plus / Plus
Query: 1 taggggaggggcaggattttattcagtggaactcaaaacaaaacaaattgatgtaaatgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggggaggggcaggattttattcagtggaactcaaaacaaaacaaattgatgtaaatgc 260
Query: 61 gggaaatgttcttccagggaggggagaataggcgtacaggtgaaaatgagtggaaaacgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggaaatgttcttccagggaggggagaataggcgtacaggtgaaaatgagtggaaaacgg 320
Query: 121 cagaaaacagcactatatacgttgtgtgaaactatcaacaaattctatacacgttatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 cagaaaacagcactatatacgttgtgtgaaactatcaacaaattctatacacgttttttt 380
Query: 181 tttttttt-----agggagtgttaagtttatttttttttccattttttattaggtattta 235
|||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 381 tttttttttttttagggagtgtgaagtttatttttttttctattttttattaggtattta 440
Query: 236 gctcatttacatttccaatgctataccaaaagtcccccatacccacccacccccactccc 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctcatttacatttccaatgctataccaaaagtcccccatacccacccacccccactccc 500
Query: 296 ctacccacccactccccctttttggccctggcg 328
|||||||||||||||||||||||||||||||||
Sbjct: 501 ctacccacccactccccctttttggccctggcg 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
