Query= MSMg01no339_e07.b1 MSMg01no339_e07.b1 CHROMAT_FILE:
MSMg01no339_e07.b1 PHD_FILE: MSMg01no339_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:04 2005
(674 letters)
>mm_chr15_30477394_30478466
Length = 1073
Score = 1241 bits (642), Expect = 0.0
Identities = 663/670 (98%), Gaps = 1/670 (0%)
Strand = Plus / Minus
Query: 5 gaattcaacgactcaccaactgtgtgtgatgttttctctctaattgccatagaacatttg 64
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 873 gaattcaacgactcagcaactgtgtgtgatgctttctctctaattgccatagaacatttg 814
Query: 65 gttctctagacactctgctgtcactaaaccaccgcaatttcatgcatggggacttgctta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gttctctagacactctgctgtcactaaaccaccgcaatttcatgcatggggacttgctta 754
Query: 125 gcaaaaatattttcaaaaagaacaaggacagctgtcaaagattatcgtaacctttgcaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gcaaaaatattttcaaaaagaacaaggacagctgtcaaagattatcgtaacctttgcaat 694
Query: 185 gtgaagaatcatgaaatctgctactggatatcttcatgggtgaggtgggaaccagtttta 244
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 693 gtgaagaatcatgaaatccgctactggatatcttcaagggtgaggtgggaaccagtttta 634
Query: 245 acacttcaatatttacctcaggctctgtaatgtatctattctcttgcatacattttgtac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 acacttcaatatttacctcaggctctgtaatgtatctattctcttgcatacattttgtac 574
Query: 305 atggtgtagcccgttaataagccatgcttgcttgtatggttttcaaaacctctactctca 364
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 573 atggtgtagcccgttaataagccatgctggcttgtatggttttcaaaacctctactctca 514
Query: 365 ggaagtagggcaggggaacatccatttttgctaattcttcttggagaagacagagcatca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ggaagtagggcaggggaacatccatttttgctaattcttcttggagaagacagagcatca 454
Query: 425 aggatgaagcgtgagaacataatccagtgttaatgccacttaatgaatgagcttatgaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aggatgaagcgtgagaacataatccagtgttaatgccacttaatgaatgagcttatgaat 394
Query: 485 ttgtgtgctttccatcacaggagggcttacagccttcacttccttgagacttggctcaag 544
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 393 ttgtgtgctttccatcacaggagggcttacagccttcacttccttgggacttggctcaag 334
Query: 545 ggaaagttttattcaaaaatgtgggtatgacatacatatttataaatatcaaaatgtatc 604
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggaaagttttattc-aaaatgtgggtatgacatacatatttataaatatcaaaatgtatc 275
Query: 605 tggtgataactgtgcagatgtctgcatataggatccttcctgtgagctgaatttcatcta 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tggtgataactgtgcagatgtctgcatataggatccttcctgtgagctgaatttcatcta 215
Query: 665 catttctatc 674
||||||||||
Sbjct: 214 catttctatc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1073
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1063
Effective search space: 705832
Effective search space used: 705832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_e07.g1 MSMg01no339_e07.g1 CHROMAT_FILE:
MSMg01no339_e07.g1 PHD_FILE: MSMg01no339_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:04 2005
(567 letters)
>mm_chr15_30320004_30320970
Length = 967
Score = 1081 bits (559), Expect = 0.0
Identities = 566/569 (99%), Gaps = 2/569 (0%)
Strand = Plus / Plus
Query: 1 atggagctggagggcttaagtgacttcaagacattcactgtaatgtttttagggctttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggagctggagggcttaagtgacttcaagacattcactgtaatgtttttagggctttga 260
Query: 61 caaagatgagggatgtcaggatttttcagtttagcgagtttccgactgactatggcaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaagatgagggatgtcaggatttttcagtttagcgagtttccgactgactatggcaatg 320
Query: 121 cccatggctcttgaagccaggaaataagagctttgcaataatggattgggtttagttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccatggctcttgaagccaggaaataagagctttgcaataatggattgggtttagttgtt 380
Query: 181 ggctctctataatttgacttgacagaatctgacccactctgaatagcagatagactcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctctctataatttgacttgacagaatctgacccactctgaatagcagatagactcaga 440
Query: 241 atgcccaataccacggcacatccctgatctgtagaagctgtgttgttacagatggattca 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 atgcccaataccacggcacatccctgatgtgtagaagctgtgttgttacagatggattca 500
Query: 301 ttccttttactaggtgagctacgtagtgagagggagtatttgccaatcaaatatttaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccttttactaggtgagctacgtagtgagagggagtatttgccaatcaaatatttaatg 560
Query: 361 gcgagtaatgtttaagcatacaagaatacttatataactcagtacattcgttaacaactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcgagtaatgtttaagcatacaagaatacttatataactcagtacattcgttaacaactc 620
Query: 421 aactaaaagaagacactctttttttccccc--tcagagaacacatataaataaatggctt 478
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 aactaaaagaagacactctttttttccccccctcagagaacacatataaataaatggctt 680
Query: 479 atcaaaaagtgctcaacactgttcatcatcaaaggcatgcacttcaaagctattatgaca 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atcaaaaagtgctcaacactgttcatcatcaaaggcatgcacttcaaagctattatgaca 740
Query: 539 tatttcttcatacctgatgataaaggcta 567
|||||||||||||||||||||||||||||
Sbjct: 741 tatttcttcatacctgatgataaaggcta 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
