Query= MSMg01no340_p03.b1 MSMg01no340_p03.b1 CHROMAT_FILE:
MSMg01no340_p03.b1 PHD_FILE: MSMg01no340_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:04 2005
(609 letters)
>mm_chr15_12519384_12520392
Length = 1009
Score = 1149 bits (594), Expect = 0.0
Identities = 603/606 (99%), Gaps = 2/606 (0%)
Strand = Plus / Plus
Query: 5 gaattcactcaggatgctggaaataatccttctcaaattctgagaaacaccagtaccaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactcaggatgctggaaataatccttctcaaattctgagaaacaccagtaccaag 264
Query: 65 atccccagtctactctccaagctgcagtagcacctaagttggccaaagaaattcttctat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atccccagtctactctccaagctgcagtagcacctaagttggccaaagaaattcttctat 324
Query: 125 agcttggatgtggtctgtctcccaagggcttgtatgttgaaagcctggtcctcagtgtgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcttggatgtggtctgtctcccaagggcttgtatgttgaaagcctggtcctcagtgtgg 384
Query: 185 caatactggcaggtgctatggaccaaaggatggggccaagtagaaagaccttaggtcaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caatactggcaggtgctatggaccaaaggatggggccaagtagaaagaccttaggtcaat 444
Query: 245 tcagagtctgatatgtaaaggaaaaatgggacacctgc-tgctctagcttcttatctatc 303
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 445 tcagagtctgatatgtaaaggaaaaatgggacacctgcct-ctctagcttcttatctatc 503
Query: 304 gacaaactcattcctggttgtttaagactgtaccaaccctaaatttatttttacacatga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gacaaactcattcctggttgtttaagactgtaccaaccctaaatttatttttacacatga 563
Query: 364 tttgaaggcagaggggactgaaggctgctgctgggtaggactgatactcaggtagtcttt 423
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttggaggcagaggggactgaaggctgctgctgggtaggactgatactcaggtagtcttt 623
Query: 424 actgcatggcatacccctgtgtcatttggccagtcaccttgagtatgtcagggctctatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 actgcatggcatacccctgtgtcatttggccagtcaccttgagtatgtcagggctctatt 683
Query: 484 tactcaatgagactgagtcacacttcataggagtctaaacctacagggctccctgatctc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tactcaatgagactgagtcacacttcataggagtctaaacctacagggctccctgatctc 743
Query: 544 aggactatgaactaagtaaaaattttaattcataagtagtttccctcaggtattttatta 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aggactatgaactaagtaaaaattttaattcataagtagtttccctcaggtattttatta 803
Query: 604 taataa 609
||||||
Sbjct: 804 taataa 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_p03.g1 MSMg01no340_p03.g1 CHROMAT_FILE:
MSMg01no340_p03.g1 PHD_FILE: MSMg01no340_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:04 2005
(549 letters)
>mm_chr15_12694343_12695293
Length = 951
Score = 988 bits (511), Expect = 0.0
Identities = 541/551 (98%), Gaps = 2/551 (0%)
Strand = Plus / Minus
Query: 1 cagaagattgccatggctacagctataggatttgctatcacgagattcattgtcttcttc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 689 cagaagattgccatggctacagctataggattttctatcacgagattcattgtcttcttc 630
Query: 61 gtgaaacggatccatatatgcattaataagattactgtgggtggctgagtcctgtctcat 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 629 gtgaaacggatccatatatgcattaataacattactgtgggtggctgagtcctgtctcat 570
Query: 121 cacgggacgagagaaccagtgagggggcgacaagcacccgaggtaaaacattgcctg-aa 179
||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 569 cacgggacgggtgaaccagtgagggggtgacaagcacccgaggtaaaacattgcctgaaa 510
Query: 180 aaaaaaaagaaagagtggcaaaaccatacattttgggtaaattgttctatgacattattt 239
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 509 aaaaaaaagaaagagtggcaaaaccgtacattttgggtaaattgttctatgacattattt 450
Query: 240 attggagggggggacctggccactggtaaagagctctcttttcaattgatgatatgaaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 attggagggggggacctggccactggtaaagagctctcttttcaattgatgatatgaaaa 390
Query: 300 gcagtggcatcaatcataattgtacattattcttatgaggaggat-aaaaaagcttaagt 358
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 389 gcagtggcatcaatcataattgtacattattcttatgaggaggataaaaaaagcttaagt 330
Query: 359 gaatcagcttttcttacctagaaagcgagaactgagaactatttgttctcccagccactg 418
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 329 gaatctgcttttcttacctagaaagcgagaactgagaactatttgttctcccagcgactg 270
Query: 419 agcctgcttccatcccgggtctttttctcatgtggcctaagattaagagtcctcagttga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agcctgcttccatcccgggtctttttctcatgtggcctaagattaagagtcctcagttga 210
Query: 479 gctcggagtgagtatggtgctgtacacctgtaaccttagcactcagggagctgaggccga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gctcggagtgagtatggtgctgtacacctgtaaccttagcactcagggagctgaggccga 150
Query: 539 agttcgaggcc 549
|||||||||||
Sbjct: 149 agttcgaggcc 139
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 951
Length adjustment: 10
Effective length of query: 539
Effective length of database: 941
Effective search space: 507199
Effective search space used: 507199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
