NACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTACTCTGTGCCATTATATGTTNGGGAGTATGTAATCTCAATT
GTATTTTGACCTCACAATTAAGATATATTTTCTCTCTAAATTTTTCCAGT
GGCTTATTTGAAAGCACATGTTTCTATCAAAAGACCTGGAGGTATAAAAC
TGGTTTAACTCCTAATACCATTACAAATACTTGAACTCAATCCCTGTTAG
TACTAGTCACCAGTAAGTACAATTTAACCCATGATTCCTCCTGAAAAATA
TTTTCCACACTACAGGCAGTTTGGAAATCCACTTTGTAGTCATTGCAGTG
AGAATCAGCCATCAGTCTTGGGCCACCTGCACATGTGCACTGCAGTATGT
GGTGAGACTCTGCTTCTCATGGCATGTCTATAGTGAGTCTTGAGCTTTTG
TTTTTGTAACCATAGCTCTTTAGTAACTTATGGTTTTGGGATAGGGAAGT
AGTGACCTCGTAAAACCAAATAGTTTTTAAAGAATAGTGTCTACTAGGAA
TGATAGTTAGCTACCCATGAACTAATTAGTCCTAGAGAGCTTTACTTTGG
AACACTAAAAAGAGTATAATGTCAGGGCTGGAATGTGATTTGACTTCAAA
CATTCATAAACTTTTGTTTCTTTTGTGTAAAGTGGGAATGCAAAATTTAA
TCCTGCAGGATTATTTAATGATGAAG

NCGAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATGATTTCTATACAGAAAATGTC
AGGTGCCATGCACTCCAGTTGAGTCAGCTTGACTTGACAGGCTGTGAAGC
CTAAAAGCCACTCACGAGGCAGAGAGTTTCAAGGAAGCTCACCTCCTGGA
GTTTTGGCGTTCTCATTTACCCAAATACTCATACTCTATTCCCCCGTTAG
TCTGGTGTATGGATCTACGAGCTTTCTTTTAATATTTTATTACAAATGCC
TTTTAAGATTAAATTCTGTTATAATTAAGCCTCCACATTGTTCCAAGGTC
CCAGAAGCCTGCAAGCTTGAAATCTGAGCTTGAAATCCAGCAGGAATGCA
GAAAGGAAGTTACCTATTCAGTTACTAATTAAGCATTACAAAGACAGTAG
CTCAGAGCTGGTCTACAAAATTTTTACCAAGGACAGTAGCAATTCTCACC
CAAACAAGGGAACAATAGAGCTAGAGAATCCCACTGAGACAGAGATCTTC
TCTACAGCTAGGTATAAAGCTTCACATTAGAAGCAAGTTGGTAAATTCTT
CTGTAGACCCAGGAAATAGGGTGTTGGGGAATTGCAGTATTCATGATAAG
GTCTGCTAGTGCAGAACCCCTGGTGGTAGGTTTTACAATAGACTAGTTTA
CACCTGGCTCCCTTCATTTGCAGCAACAGG

Query= MSMg01no340_p09.b1 MSMg01no340_p09.b1 CHROMAT_FILE:
MSMg01no340_p09.b1 PHD_FILE: MSMg01no340_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:05 2005
         (633 letters)



>mm_chr15_6139037_6140069
          Length = 1033

 Score = 1108 bits (573), Expect = 0.0
 Identities = 615/629 (97%), Gaps = 1/629 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttactctgtgccattatatgttngggagtatgtaatctcaattgtattttgacc 64
           |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 907 gaatacttactctgtgccattatatgtt-gggagtatgtaatctcaattgtattttgacc 849

                                                                       
Query: 65  tcacaattaagatatattttctctctaaatttttccagtggcttatttgaaagcacatgt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 848 tcacaattaagatatattttctctctaaatttttccagtggcttatttggaagcacatgt 789

                                                                       
Query: 125 ttctatcaaaagacctggaggtataaaactggtttaactcctaataccattacaaatact 184
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 ttctatcgaaagacctggaggtataaaactggtttaactcctaataccattacaaatact 729

                                                                       
Query: 185 tgaactcaatccctgttagtactagtcaccagtaagtacaatttaacccatgattcctcc 244
           ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tgaactccatccctgttagcactagtcaccagtaagtacaatttaacccatgattcctcc 669

                                                                       
Query: 245 tgaaaaatattttccacactacaggcagtttggaaatccactttgtagtcattgcagtga 304
           |||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 668 tgaaaaatgttctccacactacaggcagtttggaaatccacttcgtagtcattgcagtga 609

                                                                       
Query: 305 gaatcagccatcagtcttgggccacctgcacatgtgcactgcagtatgtggtgagactct 364
           |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 608 gaattagccatcagtcttgggccacctgcacatgtacactgcagtatgtggtgagactct 549

                                                                       
Query: 365 gcttctcatggcatgtctatagtgagtcttgagcttttgtttttgtaaccatagctcttt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gcttctcatggcatgtctatagtgagtcttgagcttttgtttttgtaaccatagctcttt 489

                                                                       
Query: 425 agtaacttatggttttgggatagggaagtagtgacctcgtaaaaccaaatagtttttaaa 484
           ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 488 agtaacttatggttttgggttagggaagtagtgacctcttaaaaccaaatagtttttaaa 429

                                                                       
Query: 485 gaatagtgtctactaggaatgatagttagctacccatgaactaattagtcctagagagct 544
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 428 gaatagtgtctactaggaatgatagttagctacccatgaactaattagtcctagagaggt 369

                                                                       
Query: 545 ttactttggaacactaaaaagagtataatgtcagggctggaatgtgatttgacttcaaac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ttactttggaacactaaaaagagtataatgtcagggctggaatgtgatttgacttcaaac 309

                                        
Query: 605 attcataaacttttgtttcttttgtgtaa 633
           |||||||||||||||||||||||||||||
Sbjct: 308 attcataaacttttgtttcttttgtgtaa 280


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)