Query= MSMg01no341_a12.b1 MSMg01no341_a12.b1 CHROMAT_FILE:
MSMg01no341_a12.b1 PHD_FILE: MSMg01no341_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:10 2005
(499 letters)
>mm_chr15_28461098_28461996
Length = 899
Score = 808 bits (418), Expect = 0.0
Identities = 461/478 (96%), Gaps = 8/478 (1%)
Strand = Plus / Minus
Query: 5 gaattccagatatatataaattttgaagcagaagaaaccaatttgtagatgacat-aagt 63
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 482 gaattccagaaatatataaattttgaagcagaaaaaaccaatttgtagatgacataaagt 423
Query: 64 tcaccttaatgggaattttgcctgtcacctctactgtatttatttttataaagagaatga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcaccttaatgggaattttgcctgtcacctctactgtatttatttttataaagagaatga 363
Query: 124 aatgatgaacatgagctgttgatgatgttttgtgtttcattccttcgtgaatgtatggtc 183
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 362 aatgatgaacatgagctgttgatgatgttttgt-tttcattccttcgtgaatgtatggtc 304
Query: 184 tttgatggcagccatatttatgtttcagaatactattttatcctcattattttgagttct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 303 tttgatggcagccatatttatgtttcagaatactattttatcctcattattttgagtact 244
Query: 244 tgaagaaggaacttacaatcattccttacaacattcttctaatataaaaaataaataaaa 303
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 243 tgaagaaggaacttacaatcattccttacaacattcttctaatgtaaaaaataaataaaa 184
Query: 304 taaaaaatttaaaaaa----ctcattgaattttctccacaactcagtatttccccatgga 359
|||||||| |||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 183 taaaaaat--aaaaaaaaaactcaatgaattttctccacaactcagtatttccccatgga 126
Query: 360 tccaacataattgactagtactcactctcagtgtgtttctttctaaaatttggaatgaat 419
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 125 tccaacataattgcctagtactcgctctcagtgtgtttctttctaaaatttggaatgaat 66
Query: 420 tgaaacaacttacaagtcaagttcaggggaaaattcttaaatgttcttgctgtgttag 477
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 65 tgaaacaacttacaagtcaagttcgggggaaaattcttaaatattcttgctgtgttag 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_a12.g1 MSMg01no341_a12.g1 CHROMAT_FILE:
MSMg01no341_a12.g1 PHD_FILE: MSMg01no341_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:10 2005
(301 letters)
>mm_chr15_28295771_28296470
Length = 700
Score = 528 bits (273), Expect = e-154
Identities = 294/301 (97%), Gaps = 1/301 (0%)
Strand = Plus / Plus
Query: 1 actagcattgtggacatccagttcttggcagccatgatccatcctgggggtggacgcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actagcattgtggacatccagttcttggcagccatgatccatcctgggggtggacgcaat 260
Query: 61 gacataccacagcgcttgaagagacagttctccatattcaactgtaccttgccttcagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacataccacagcgcttgaagagacagttctccatattcaactgtaccttgccttcagat 320
Query: 121 gcttccatggacaagatttttggtaaaatggttgttagttggtaggggaaagagggatgt 180
||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 321 gcttccatggacaagatctttggtaaaatggttgttcgttggcaggggaaagagggatgt 380
Query: 181 gatatctgctctcagcaagtctacgcagagggcaccatggagtgggagaagctcttggtt 240
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 ggtatctgctctcagcaagtctacgcagagggcaccacggagtgggagaagctcttggtt 440
Query: 241 tgctatccttattcctgttttactttgcttcctacagtgattaattataaatatttatgg 300
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 tgc-atccttattcctgttttactttgtttcctacagtgattaattataaatatttatgg 499
Query: 301 a 301
|
Sbjct: 500 a 500
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 700
Length adjustment: 9
Effective length of query: 292
Effective length of database: 691
Effective search space: 201772
Effective search space used: 201772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
