Query= MSMg01no341_h07.b1 MSMg01no341_h07.b1 CHROMAT_FILE:
MSMg01no341_h07.b1 PHD_FILE: MSMg01no341_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:43 2005
(459 letters)
>mm_chr15_5191623_5192485
Length = 863
Score = 841 bits (435), Expect = 0.0
Identities = 455/463 (98%), Gaps = 4/463 (0%)
Strand = Plus / Plus
Query: 1 atcgccctgggtttgcagactctgggccacagagtggagcgctagagtaagtaacgcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcgccctgggtttgcagactctgggccacagagtggagcgctagagtaagtaacgcaag 260
Query: 61 tgagttgtcccctccccccatctaactgatcccgcctgaaggttcagggaagatgcaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagttgtcccctccccccatctaactgatcccgcctgaaggttcagggaagatgcaaag 320
Query: 121 caaaacagggcaataaggggaacctggcaggggagggggcacagggggttgtccagggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaacagggcaataaggggaacctggcaggggagggggcacagggggttgtccagggga 380
Query: 181 cctcagaactcttgctttcggggaaagaacctcaggggacctgggggcggggaatcacct 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcagaacttttgctttcggggaaagaacctcaggggacctgggggcggggaatcacct 440
Query: 241 cctgagtctctttaaggtcaggacttagaaggaaaacctgggtttgctcagagaagcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgagtctctttaaggtcaggacttagaaggaaaacctgggtttgctcagagaagcctt 500
Query: 301 gaagtggtcccagctcagaactggagaaaactgt--ccacc--ccacccccccaaaggaa 356
|||||||||||||||||||||||||||||||| | ||||| || ||||||||||||||
Sbjct: 501 gaagtggtcccagctcagaactggagaaaactctgcccacctcccccccccccaaaggaa 560
Query: 357 tcagggaaaaggaggggagcgtggaggcggatggatgcaggagagaggcccagtgggtct 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagggaaaaggaggggagcgtggaggcggatggatgcaggagagaggcccagtgggtct 620
Query: 417 caggccccaaacacttaccacgagcggaatggagcatatgagc 459
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 caggccccaaacacttaccacgagcggaatggagcagatgagc 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 863
Length adjustment: 10
Effective length of query: 449
Effective length of database: 853
Effective search space: 382997
Effective search space used: 382997
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_h07.g1 MSMg01no341_h07.g1 CHROMAT_FILE:
MSMg01no341_h07.g1 PHD_FILE: MSMg01no341_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:43 2005
(403 letters)
>mm_chr15_5381788_5382589
Length = 802
Score = 733 bits (379), Expect = 0.0
Identities = 397/403 (98%), Gaps = 1/403 (0%)
Strand = Plus / Minus
Query: 1 tttgaagctggctggctgcaacatacggaattccccaagttgcttgtctgaagcatcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tttgaagctggctggctgcaacatacggaattccccaagttgcttgtctgaagcatcagc 398
Query: 61 acagactaaagttagctaagggtggcagttggaatgggcagacatcaaatgagagtattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 acagactaaagttagctaagggtggcagttggaatgggcagacatcaaatgagagtattt 338
Query: 121 cctaacgtaagatgttcactaaagaggaagtgctaataaatatttttttttctcaccaga 180
||||| ||||||||||||||||||||||||| ||||||| || |||||||||||||||||
Sbjct: 337 cctaatgtaagatgttcactaaagaggaagtactaataacta-ttttttttctcaccaga 279
Query: 181 aaagcaagagttgatttcagatttaaagaataccatacaaaacaccttttgacttcatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aaagcaagagttgatttcagatttaaagaataccatacaaaacaccttttgacttcatat 219
Query: 241 tttaaaacaaaacgtaggcatacttatggtataccatgtgatatttaacatatatacatt 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tttaaaacaaaacttaggcatacttatggtataccatgtgatatttaacatatatacatt 159
Query: 301 gtatcatgttcaaattagggttaacttaactatacctcagagatatatcatatctttgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gtatcatgttcaaattagggttaacttaactatacctcagagatatatcatatctttgca 99
Query: 361 acataaatacttaaaaccacttcttttagattttttttaaaat 403
||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 98 acataaatacttaaaaccacttcttttagatttttttaaaaat 56
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 802
Length adjustment: 9
Effective length of query: 394
Effective length of database: 793
Effective search space: 312442
Effective search space used: 312442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
