Query= MSMg01no342_i22.b1 MSMg01no342_i22.b1 CHROMAT_FILE:
MSMg01no342_i22.b1 PHD_FILE: MSMg01no342_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:06 2005
(474 letters)
>mm_chr15_80567347_80568220
Length = 874
Score = 735 bits (380), Expect = 0.0
Identities = 431/474 (90%), Gaps = 40/474 (8%)
Strand = Plus / Minus
Query: 1 atgccatgaaagcctctaccattaagctacccggtgcccttttgcacatttctgattgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 atgccatgaaagcctctaccattaagctacccggtgcccttttgcacatttctgattgtg 723
Query: 61 tgatatactttacaataaaatataaataaataaataaataaataaataaataaataaata 120
|||||||||||||||||||||
Sbjct: 722 tgatatactttacaataaaat--------------------------------------- 702
Query: 121 aataaataaataaataaataaataaatatacttcttgaagtctggggcagaggaatgaca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 -ataaataaataaataaataaataaatatacttcttgaagtctggggcagaggaatgaca 643
Query: 181 atggaaggactgcctgagcaaccttggtgagactcttcctcaacagagaaacaaacaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 atggaaggactgcctgagcaaccttggtgagactcttcctcaacagagaaacaaacaaat 583
Query: 241 gaagggtatgtgttgtgcatgataaaactgtacaaattaaaccacagagcctagactctc 300
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gaagggtaagtggcgtgcatgataaaactgtacaaattaaaccacagagcctagactctc 523
Query: 301 cagctgagctcttccttcaggtgcccagacctttgccactcacccttttcaccttgtccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cagctgagctcttccttcaggtgcccagacctttgccactcacccttttcaccttgtccg 463
Query: 361 ccgcactcactcccaaccacttattttcttcacttccagtcgtgacagaaaaccatgcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ccgcactcactcccaaccacttattttcttcacttccagtcgtgacagaaaaccatgcag 403
Query: 421 gcctagcaatcatgttcctgccgctctctttcctactggaaatctctgtgccag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gcctagcaatcatgttcctgccgctctctttcctactggaaatctctgtgccag 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_i22.g1 MSMg01no342_i22.g1 CHROMAT_FILE:
MSMg01no342_i22.g1 PHD_FILE: MSMg01no342_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:06 2005
(427 letters)
>mm_chr15_80420699_80421524
Length = 826
Score = 766 bits (396), Expect = 0.0
Identities = 419/427 (98%), Gaps = 1/427 (0%)
Strand = Plus / Plus
Query: 1 ctacaactcttgctcctgagattcgctagttcttcccattgctctgactgcttgcctctg 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 ctacaactcttgctcctgagattcgctagttcttcccactgctctgactgcttgcctctg 260
Query: 61 agctgtgtgagcggcaactgatcacctcttggtgtgtttagagctgttcttgccctagac 120
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctgtgtgagcggcagctgatcacctcttggtgtgtttagagctgttcttgccctagac 320
Query: 121 agtctaagcgttaatcgacactgccatgtggttgtagaacccatgagttggggttaggct 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtctaagcggtaatcgacactgccatgtggttgtagaacccatgagttggggttaggct 380
Query: 181 cctgttggacagcaggaatcaggcagaactgtgaatgctctacccaaaaaaggaaaagaa 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccgttggacagcaggaatcaggcagaactgtgaatgctctacccaaaaaaggaaaagaa 440
Query: 241 aactccaaggaacacccttggccttaagggagaagttcagatggatactgaatttgtatt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 aactccaaggaacacccttggccttaagggagaagttcagatggatactgaacttgtatt 500
Query: 301 ggagtctcagctcctcctttgccccataggtttggctcagataagtaacttagacataga 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 ggagtctcagctcctcctttgccc-ataggtttggctcagataagtaacttagacataga 559
Query: 361 ggggtttgtggttctcttcaaaactganagcaattctgttttctcagaattgtgtgtgtg 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 560 ggggtttgtggttctcttcaaaactgaaagcaattctgttttctcagaattgtgtgtgtg 619
Query: 421 tggcgtg 427
|||||||
Sbjct: 620 tggcgtg 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 826
Length adjustment: 9
Effective length of query: 418
Effective length of database: 817
Effective search space: 341506
Effective search space used: 341506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
