Query= MSMg01no343_i21.b1 MSMg01no343_i21.b1 CHROMAT_FILE:
MSMg01no343_i21.b1 PHD_FILE: MSMg01no343_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:26 2005
(315 letters)
>mm_chr15_6943190_6943904
Length = 715
Score = 594 bits (307), Expect = e-174
Identities = 313/315 (99%)
Strand = Plus / Plus
Query: 1 aagaagacattgattttgaggtaggtcggaatgaagggctgggccagggccaggatttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaagacattgattttgaggtaggtcggaatgaagggctgggccagggccaggatttca 260
Query: 61 gaccttgcaatattttgccttctgggagagtgtctgtaggctgatgataatgatgacagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaccttgcaatattttgccttctgggagagtgtctgtaggctgatgataatgatgacagt 320
Query: 121 tggccaggagcctttgcagatgcatttcccaagcttttccagacttaatgagtccataga 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggccaggcgcctttgcagatgcatttcccaagcttttccagacttaatgagtccataga 380
Query: 181 gcttcccacaggccagagctgccgtgttagtcctaagtaactacactaaggaacgaggag 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttcccacaggccagagctgtcgtgttagtcctaagtaactacactaaggaacgaggag 440
Query: 241 ggtctcagtgagtgatggtgacagttgagggacaatctcagttttaattctcacattcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtctcagtgagtgatggtgacagttgagggacaatctcagttttaattctcacattcct 500
Query: 301 tgcttggaatggctc 315
|||||||||||||||
Sbjct: 501 tgcttggaatggctc 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_i21.g1 MSMg01no343_i21.g1 CHROMAT_FILE:
MSMg01no343_i21.g1 PHD_FILE: MSMg01no343_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:26 2005
(317 letters)
>mm_chr15_7113421_7114141
Length = 721
Score = 557 bits (288), Expect = e-163
Identities = 309/318 (97%), Gaps = 4/318 (1%)
Strand = Plus / Minus
Query: 4 gagctgctccaagctgtgggtgtcattaaataacagagactgttctaatgagtctggtac 63
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 453 gagctgctccaagctgtgggtgtcattaaacaacagagactgttctaatgagtctggtac 394
Query: 64 tgagcgccaaagccaacgg----ctaactctgaagacctacaaaggctggccccgcagcc 119
|||||||||||||||| || |||||||||||| ||||||||||||||||||||||||
Sbjct: 393 tgagcgccaaagccaatggctaactaactctgaaggcctacaaaggctggccccgcagcc 334
Query: 120 ggcacgcagcttcagtacagtatccaagaccatgatgctgagcagcagcaagtgtccaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggcacgcagcttcagtacagtatccaagaccatgatgctgagcagcagcaagtgtccaat 274
Query: 180 agtccaaataagacagcgttcagggagaagagaggagagtacagagaggaacgagggtgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 agtccaaataagacagcgttcagggagaagagaggagagtacagagaggaacgagggtgt 214
Query: 240 ggtcctttcggttactttgctattgctgtgttaaaacaccgtggctcagacaactcagac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 213 ggtcctttcggttactttgctattgctgtgttaaaacaccgtggctcagacaactcaaag 154
Query: 300 aaggaagggctcgtctgg 317
||||||||||||||||||
Sbjct: 153 aaggaagggctcgtctgg 136
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 721
Length adjustment: 9
Effective length of query: 308
Effective length of database: 712
Effective search space: 219296
Effective search space used: 219296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
