Query= MSMg01no344_e04.b1 MSMg01no344_e04.b1 CHROMAT_FILE:
MSMg01no344_e04.b1 PHD_FILE: MSMg01no344_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:23 2005
(490 letters)
>mm_chr15_6443664_6444554
Length = 891
Score = 926 bits (479), Expect = 0.0
Identities = 488/491 (99%), Gaps = 1/491 (0%)
Strand = Plus / Minus
Query: 1 acaatttctccttttcaaaatgttctctgtaagaagatatactcacaaagttgtgcttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 acaatttctccttttcaaaatgttctctgtaagaagatatactcacaaagttgtgcttag 632
Query: 61 gacaatacagctgccatttctctaggtaggatattgatgtgaattaagtaggctttcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gacaatacagctgccatttctctaggtaggatattgatgtgaattaagtaggctttcaat 572
Query: 121 ttatgaagga-gaaacttaaacaactagagtggacagaatctttactaatctgaagatct 179
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttatgaaggaggaaacttaaacaactagagtggacagaatctttactaatctgaagatct 512
Query: 180 gaattgtaaacaggatatactacatgttgggcctagccagaagcattgtgttaactgagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gaattgtaaacaggatatactacatgttgggcctagccagaagcattgtgttaactgagg 452
Query: 240 tgatgagtgtctttgaatattctagtaaatacagtggggacatttcagcagagcctttat 299
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tgatgagtgtcttcgaatattctagtaaatacagtggggacatttcagcagagcctttat 392
Query: 300 tcctgcagatgtgaattgacagctctaaaacatgctgcactgtttaccagagaccagcct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tcctgcagatgtgaattgacagctctaaaacatgctgcactgtttaccagagaccagcct 332
Query: 360 tggatccctttgtaaaggacagactgaacttggtttacagagcagagaggacaagcctgc 419
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 331 tggatccctttgtaaaggacagactgaacttggtttacagagctgagaggacaagcctgc 272
Query: 420 ttgacgtcatctgctgggtcttcgattcttttcctacttaaaatcttctggctaaaattt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttgacgtcatctgctgggtcttcgattcttttcctacttaaaatcttctggctaaaattt 212
Query: 480 tatttactgaa 490
|||||||||||
Sbjct: 211 tatttactgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 891
Length adjustment: 10
Effective length of query: 480
Effective length of database: 881
Effective search space: 422880
Effective search space used: 422880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_e04.g1 MSMg01no344_e04.g1 CHROMAT_FILE:
MSMg01no344_e04.g1 PHD_FILE: MSMg01no344_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:23 2005
(414 letters)
>mm_chr15_6284020_6284833
Length = 814
Score = 801 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Plus
Query: 1 aactcaggacctctggaagagcagtcagtgctcttaaccactgagccatctctccagccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactcaggacctctggaagagcagtcagtgctcttaaccactgagccatctctccagccc 260
Query: 61 aaggcaaagcacttcatatgatgatccagagtcctagaaatagttttgatacacatcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggcaaagcacttcatatgatgatccagagtcctagaaatagttttgatacacatcatt 320
Query: 121 ttggtttactaagctgaaaccttaactgggtcagactactgggttccggggtgatttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggtttactaagctgaaaccttaactgggtcagactactgggttccggggtgatttcat 380
Query: 181 ctttactgaaaatatgactttgaccttgcttgatgcaaaacaactcaaggtttgatttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttactgaaaatatgactttgaccttgcttgatgcaaaacaactcaaggtttgatttct 440
Query: 241 aaatgggtttccctggttaaatttacaaaacagggagaccgctttgataaaaatatgctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatgggtttccctggttaaatttacaaaacagggagaccgctttgataaaaatatgctt 500
Query: 301 ttgatgagattttggaattcattgctggatatactctgtgagtacttgcaccatgtcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgatgagattttggaattcattgctggatatactctgtgagtacttgcaccatgtcaac 560
Query: 361 ttgaaagaaaagagcaaatatattatattttgggggaaggggagttttttatgt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgaaagaaaagagcaaatatattatattttgggggaaggggagttttttatgt 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
