TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATGAAATTCTTCGCTAATTGGATGGATCTGGAGGATGTCATCCTA
AGTGACCTAACCCAACCAAGAAAGAACACATGATATGTACTCGCTGATAA
ATGCATATTAGCCCAGAACCTCAGAATACCAAGATATGATTTGCAAAACA
CATGAAAATGAAGAAGATTGAAGACCCAAGTGTGGATATTTTGATCCTTC
TTAGAAGGGGAAGAAAATGACCATGGAAGGAGTGACAAACACAAAGTTTG
GAGCACTGAAGGAATGACCATCCAGAAACTGCCCCACTGGGGATCCATCC
CATAAACAACCACCAAACCCAGACACTAGGCAGATGCCAACAAGAGCTTG
CTGACAGGAACCTGATATAGCTGTCTCCTGGGAGGCTTTGCCAGTGCCTG
ACCAATATAGAAGTGGATGCTCACAGTCATCCATTAGATTGAACACAGGT
TCCCTAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGTTTTGC
CACCCCCTAGGAGAAACACAATAAGAAATAACCCGTAAACCCCGAGCTTC
CCGGGGCCAAAGAAATGGAGGGTCCCCTGACACTCTCTGCTTATTAACTA
AAAATGACCTATTTGTTTGTCTCATTGGGGGGGTAGTCTTTTTCCTTAAA
GAATTATTTCTCCCCATTTTCCTATTCTTTGTCTTTNTATTTTTCTTTTC
CTTTTTTT

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATAGCTGTCTGCTTAAATACTATTTCAAA
AATTTTGGAAAACTTACTCAGGAAACATGTTCCCCTTCTACGTGATCTAC
CTGTTTACTCCCCTTAGGTGAAGTCACCAATTTCTGTAGCAAAGTTTACA
TCCTTTATTTTCTTTTAGGATTTCAGTAATACAAGTGATACATTTTTCCA
GGACATTTGTATAGGAAATATGACTCAGATAAAGAAATAGCACATAGTTT
TCTGTCTTTGGTCTAGAATTTGAAAGGACGTAAATGGCTTTGTTATCTTC
CAAAATGATTTGAAGTTAAAGAACTGAACAAGAACATTAAAACGGGATAA
TTGAGAGAGATTTTTACAAGTTTATTTGTTATACCATTACATGCAATTTA
GAAATAATAACAAGCTCTAATGAAGAGAAACTGCTAAGAGGCTGAAGTTA
CATGAAGATAATCTCAGATGCAGAAGGAAAAAACAGGGATAAATAACACC
AAAGGTTTTGTAAATCTCAGAGAATTATATTATGTTTATTTANNATACTT
ATGTACACATATACACATCCATGTGCACAAATACACACACATTTATGCAC
ACACTCCCATGTGCACAAATATACACACATTTATGCACACACTCCCATGT
GCACAAATACACACACATTTATGCACACACTTCCATGTGC

Query= MSMg01no344_i24.g1 MSMg01no344_i24.g1 CHROMAT_FILE:
MSMg01no344_i24.g1 PHD_FILE: MSMg01no344_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:47 2005
         (543 letters)



>mm_chr15_48902048_48902990
          Length = 943

 Score =  977 bits (505), Expect = 0.0
 Identities = 533/543 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagctgtctgcttaaatactatttcaaaaattttggaaaacttactcaggaaacatgtt 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 atagctgtctgcttaaatactatttcaagaattttggaaaacttactcaggaaacatgtt 260

                                                                       
Query: 61  ccccttctacgtgatctacctgtttactccccttaggtgaagtcaccaatttctgtagca 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 ccccttctacgtgatctacctgtttactccccttaggtgaagtcaccaatttctgttgca 320

                                                                       
Query: 121 aagtttacatcctttattttcttttaggatttcagtaatacaagtgatacatttttccag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 aagtttacatcctttattttcttttaggatttcagtaatacaagtgatacattttcccag 380

                                                                       
Query: 181 gacatttgtataggaaatatgactcagataaagaaatagcacatagttttctgtctttgg 240
           |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 gacatttgcataggaaatatgactcagataaagaaataacacatagttttctgtctttgg 440

                                                                       
Query: 241 tctagaatttgaaaggacgtaaatggctttgttatcttccaaaatgatttgaagttaaag 300
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctagaatttgaaaggatgtaaatggctttgttatcttccaaaatgatttgaagttaaag 500

                                                                       
Query: 301 aactgaacaagaacattaaaacgggataattgagagagatttttacaagtttatttgtta 360
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 aactgaacaagaacattaaaacaggataattgagagagatttttacaagtttatttgtta 560

                                                                       
Query: 361 taccattacatgcaatttagaaataataacaagctctaatgaagagaaactgctaagagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taccattacatgcaatttagaaataataacaagctctaatgaagagaaactgctaagagg 620

                                                                       
Query: 421 ctgaagttacatgaagataatctcagatgcagaaggaaaaaacagggataaataacacca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgaagttacatgaagataatctcagatgcagaaggaaaaaacagggataaataacacca 680

                                                                       
Query: 481 aaggttttgtaaatctcagagaattatattatgtttatttannatacttatgtacacata 540
           |||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||
Sbjct: 681 aaggttttgtaaatctcagagaattatattatgtttatttaaaatacttatgcacacata 740

              
Query: 541 tac 543
           |||
Sbjct: 741 tac 743


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)