Query= MSMg01no345_p04.b1 MSMg01no345_p04.b1 CHROMAT_FILE:
MSMg01no345_p04.b1 PHD_FILE: MSMg01no345_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:30 2005
(553 letters)
>mm_chr15_66464947_66465899
Length = 953
Score = 1036 bits (536), Expect = 0.0
Identities = 544/547 (99%)
Strand = Plus / Minus
Query: 7 ggaattcactgtgtatattaggctgatttcaaactcagagatccacctgcctctgcctct 66
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ggaattcactgtgtagattaggctgatttcaaactcagagatccacctgcctctgcctct 604
Query: 67 gtctctcgagtgctgggattaaaggtgtgtgctaccactgttcaacatttttcttactgt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gtctctcgagtgctgggattaaaggtgtgtgctaccactgttcaacatttttcttactgt 544
Query: 127 agatttcttttaaatattctgtcttctgaagtgctattgtggacctccaaaagactacct 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agatttcttttaaatattctgtcttctgaagtgctattgtggacctccaaaagactacct 484
Query: 187 gataaactatcatataatctgtgaagacagttttatttttaaacttcccattaaatattt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gataaactatcatataatctgtgaagacagttttatttttaaacttcccattaaatattt 424
Query: 247 taaaaagcttacctgcatttgctttttttagttaggttttgcatttgtggttaactgatg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 taaaaagcttacctgcatttgctttttttagttaggttttgcatttgtggttaactgatg 364
Query: 307 ttatgcttttattttttagatttgtatttgaatttgtaagaatgggtctgtacaaagttt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttatgcttttattttttagatttgtatttgaatttgtaagaatgggtctgtacaaagttt 304
Query: 367 agagctaagacgaaaggatggaccatccagagactgccatacccgggggttcaccccata 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agagctaagacgaaaggatggaccatccagagactgccatacccgggggttcaccccata 244
Query: 427 atcagccaccaaacgcagacactattgcatatgccagcaagattttgctgaaggaggcct 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atcagccaccaaacgcagacactattgcatatgccagcaagattttgctgaaggaggcct 184
Query: 487 gatatagctgtctcctgtaaggctttgccagtgcctgncaaatacagagatggatgctca 546
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 183 gatatagctgtctcctgtaaggctttgccagtgcctggcaaatacagaggtggatgctca 124
Query: 547 cagtcat 553
|||||||
Sbjct: 123 cagtcat 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_p04.g1 MSMg01no345_p04.g1 CHROMAT_FILE:
MSMg01no345_p04.g1 PHD_FILE: MSMg01no345_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:31 2005
(371 letters)
>mm_chr15_66304753_66305522
Length = 770
Score = 642 bits (332), Expect = 0.0
Identities = 362/372 (97%), Gaps = 3/372 (0%)
Strand = Plus / Plus
Query: 1 actgagctatcagagttttacg-tgatataagaagcaagacaggaaccatcagccatgtg 59
||||| |||||||||||||| | ||||||| |||||||||||||||||||||||||||||
Sbjct: 201 actgacctatcagagtttta-gctgatata-gaagcaagacaggaaccatcagccatgtg 258
Query: 60 ccctgaaattctgacttacaaaactgcgggacgggattgtctattgagacatagcttcct 119
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 259 ccctgaaattctgacttacaaaaccgtgggacgggattgtctattgagacatagcttcct 318
Query: 120 ttagtttgtttctttgccacatgaaggaattggaaatctaaagtatatgaagcaagagag 179
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 319 ttagtttgtttctttgccacatgaaggaattggaactctaaagtatatgaagcaagagag 378
Query: 180 taccagtgttctcatagctcttgagtggctgagttgaggcttgaacttatatctgctttc 239
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 379 taccagtgttctcatagcttttgagtggctgagttgaggcttgaacttagatctgctttc 438
Query: 240 ctgaatagcatttctgagctggcatatgagaatctctgcctgtgttactgctttacaaat 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctgaaaagcatttctgagctggcatatgagaatctctgcctgtgttactgctttacaaat 498
Query: 300 ttcatttttatcctcatcatcttcatcacgattgtcatcattatcatcgtgaccatcatc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttcatttttatcctcatcatcttcatcacgattgtcatcattatcatcgtgaccatcatc 558
Query: 360 ttcatcaccacc 371
||||||||||||
Sbjct: 559 ttcatcaccacc 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 770
Length adjustment: 9
Effective length of query: 362
Effective length of database: 761
Effective search space: 275482
Effective search space used: 275482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
