Query= MSMg01no346_p01.b1 MSMg01no346_p01.b1 CHROMAT_FILE:
MSMg01no346_p01.b1 PHD_FILE: MSMg01no346_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:45 2005
(420 letters)
>mm_chr15_85750571_85751390
Length = 820
Score = 754 bits (390), Expect = 0.0
Identities = 414/428 (96%), Gaps = 10/428 (2%)
Strand = Plus / Minus
Query: 1 tgggaaaacctaaacctacccacatacaccatggaaacacacacaaaggtgtgtgcacac 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tgggaaaacctaaacctaccctcatacaccatggaaacacacacaaaggtgtgtgcacac 688
Query: 61 ctaatatagatgtgatctatgtgcaaagatactttagagtcacacatacatatgcagga- 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ctaatatagatgtgatctatgtgcaaagatactttagagtcacacatacatatgcaggac 628
Query: 120 ---------caagtacacaggtgcacacaaaatatccagaagcagccaggcacacacaag 170
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cacgtagggcaagtacacaggtgcacacaaaatatccagaagcagccaggcacacacaag 568
Query: 171 gcttcctgagaaggccacagccgagatgggctgctcacctatagagcacctgccatatgg 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gcttcctgagaaggccacagccgagatgggctgctcacctatagagcacctgccatatgg 508
Query: 231 tagttaataagagcacccattactctgccgggcaaagccacttgcaggataatgggactc 290
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tagttaacacgagcacccattactctgccgggcaaagccacttgcaggataatgggactc 448
Query: 291 agaggtgagcccacgcagagaaaagtagcagtgttggtcccaggcgactgtccctctgca 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agaggtgagcccacgcagagaaaagtagcagtgttggtcccaggcgactgtccctctgca 388
Query: 351 gcagggttggtttggcctgttcctggagtcatcagacacactccaaaaatgacccgattc 410
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 387 gcagggttggtttggcctgttcctggagacatcagacacactccaaaaatgacccgattc 328
Query: 411 atgatgtg 418
||||||||
Sbjct: 327 atgatgtg 320
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_p01.g1 MSMg01no346_p01.g1 CHROMAT_FILE:
MSMg01no346_p01.g1 PHD_FILE: MSMg01no346_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:45 2005
(420 letters)
>mm_chr15_85600139_85600959
Length = 821
Score = 704 bits (364), Expect = 0.0
Identities = 406/420 (96%), Gaps = 2/420 (0%)
Strand = Plus / Plus
Query: 1 acctactgtaggtccatgctcaactttcctcaccccccgcccccctctctgccatagttt 60
|||||||||||||||||||||||||||||||| ||||| ||||||||| |||| ||||||
Sbjct: 202 acctactgtaggtccatgctcaactttcctca-cccccacccccctctttgccgtagttt 260
Query: 61 atgagacagtctctcagtgaacctgtcattcctactgcccagcactgatgtcacaaacac 120
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 gtgagacagtctctcaatgaacctgtcattcctactgcccagcactgatgtcacagacat 320
Query: 121 tgtcaccacaccctgctccttacatggattcttatggttcaaccttgggtcctcatgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtcaccacaccctgctccttacatggattcttatggttcaaccttgggtcctcatgctt 380
Query: 181 acattctgggtgtcatgggtgtcaccgcttctgccagttactaaactagggtccttgtct 240
||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||
Sbjct: 381 acattctgggtgtcatgggtgtcactgcttctgccagttactaagccagggtccttgtct 440
Query: 241 gtcctaggctcagctgcaaatgcctgatgcagccatcttcacatgctgtcaccctccttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcctaggctcagctgcaaatgcctgatgcagccatcttcacatgctgtcaccctccttc 500
Query: 301 acgcaccccccccc-agctcttttaggtagcctccgggtgtacagggacaggctgacagt 359
|||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 501 acgcaccccccccccagctcttttaggtagcctctgggtgtagagggacaggctgacagt 560
Query: 360 ctctcgaggacttgggtccatcctgctcttgttctgtgagtgcagatctcaccctgctgc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctctcgaggacttgggtccatcctgctcttgttctgtgagtgcagatctcaccctgctgc 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 821
Length adjustment: 9
Effective length of query: 411
Effective length of database: 812
Effective search space: 333732
Effective search space used: 333732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
