XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCA
TGGTTTACTATACAAAAAAAGAAGTAAACTTAAAACCTTACTGAAAAAGA
TGTGTGGATATGTATGTATGCATGTAAAACTTTTTAAAAACATGATAAAG
CACTGGGGCTATCTAATTAGGTAAATTTTCTATAGAATGATATTTAAATG
TATAAGGATATAATATTGGGGTATAGGAAACAGTTCATTGTTTAAAGGCC
TCTCCAATCACGAGGAACTGAGTTTGTACCCCCAGCACCTGTAAAAGCTG
GGCTTGGCTGCATGTGCCTATAGCCTCACCGATAGAGGACAAAGGCAGGC
AGCCTGTTGTGGCATCTTGGTAGTCATCCAGTTACTAAATTAGTAAGACT
CTGGTTTATCTGAGACCCTGCCTCAGTGCACAAAGTCTGAGAGCCATAGA
GGAAGATATCTGATGTCTGGCTCAACAAGCATGTTCATGGCCATGTACCC
CTACCTGTACTTATGCATGCATTAAAAAAGTTAAGTCTAGTTTTCCTTTC
AGATTTCTCAAGGGTTTTAATATAGAAAATCGTAAGCATTATTAATCTAA
AAATAATGAACAAGAAATTTGAACCCACCAAAAAGATCTTGGCCCTGTAG
CAACTTACCCACATTTATGTTTGATCTTAGCTAATGTCAGAGAGAGAACT
GTGTATAAGAGTTAGGATCTGAGAAN

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCTGAGAAG
CACCTGACAAAATGTTCAACATCCTTAATCATCAGAGAAATGGAAATCAA
AACAACCCTGAGATCCCATCTCACACCAGTCAGAATGGCTAAGATCAAAA
ATTTAGGTGTCAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTC
CTCCATTATTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGT
CTGGCGGTTCCTCAAAAAATTGGACATAGTACTACCGGAGGATGCCACAA
TACCTCTTCTGGGCATATATCCAGAAGATGATCTAACTGGTAAGAAGGAC
ACATGTTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTG
GAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAAAAAATGTGGT
ACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATG
AAATTCCTAGGCAAATGGTTGGACCTGGAGGGCATCATCCTGAGTGGAGT
AACACAATCCCCAAAGAACTCACGTAATATATACTCCCTGGGAAGGGGAA
TTAGGCCCGAAACTTATTATAACCGCAGAAATAAGATAAATTTGCAAAAC
CCTCGAACTGAAAAAAAGGGAGACCCCAGGGGGGACTGGTGTCCCTTC

Query= MSMg01no348_g13.b1 MSMg01no348_g13.b1 CHROMAT_FILE:
MSMg01no348_g13.b1 PHD_FILE: MSMg01no348_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:41 2005
         (631 letters)



>mm_chr15_41685421_41686450
          Length = 1030

 Score = 1181 bits (611), Expect = 0.0
 Identities = 623/627 (99%), Gaps = 1/627 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccatggtttactatacaaaaaaagaagtaaacttaaaaccttactgaaaaagatg 64
           ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatggcttaatatacaaaaaa-gaagtaaacttaaaaccttactgaaaaagatg 263

                                                                       
Query: 65  tgtggatatgtatgtatgcatgtaaaactttttaaaaacatgataaagcactggggctat 124
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 tgtggatatgtatgtatgcatgtaaaacttttaaaaaacatgataaagcactggggctat 323

                                                                       
Query: 125 ctaattaggtaaattttctatagaatgatatttaaatgtataaggatataatattggggt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctaattaggtaaattttctatagaatgatatttaaatgtataaggatataatattggggt 383

                                                                       
Query: 185 ataggaaacagttcattgtttaaaggcctctccaatcacgaggaactgagtttgtacccc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataggaaacagttcattgtttaaaggcctctccaatcacgaggaactgagtttgtacccc 443

                                                                       
Query: 245 cagcacctgtaaaagctgggcttggctgcatgtgcctatagcctcaccgatagaggacaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cagcacctgtaaaagctgggcttggctgcatgtgcctatagcctcaccgatagaggacaa 503

                                                                       
Query: 305 aggcaggcagcctgttgtggcatcttggtagtcatccagttactaaattagtaagactct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aggcaggcagcctgttgtggcatcttggtagtcatccagttactaaattagtaagactct 563

                                                                       
Query: 365 ggtttatctgagaccctgcctcagtgcacaaagtctgagagccatagaggaagatatctg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggtttatctgagaccctgcctcagtgcacaaagtctgagagccatagaggaagatatctg 623

                                                                       
Query: 425 atgtctggctcaacaagcatgttcatggccatgtacccctacctgtacttatgcatgcat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgtctggctcaacaagcatgttcatggccatgtacccctacctgtacttatgcatgcat 683

                                                                       
Query: 485 taaaaaagttaagtctagttttcctttcagatttctcaagggttttaatatagaaaatcg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 taaaaaagttaagtctagttttcctttcagatttctcaagggttttaatatagaaaatcg 743

                                                                       
Query: 545 taagcattattaatctaaaaataatgaacaagaaatttgaacccaccaaaaagatcttgg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 taagcattattaatctaaaaataatgaacaagaaatttgaacccaccaaaaagatcttgg 803

                                      
Query: 605 ccctgtagcaacttacccacatttatg 631
           |||||||||||||||||||||||||||
Sbjct: 804 ccctgtagcaacttacccacatttatg 830


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1030
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1020
Effective search space:   633420
Effective search space used:   633420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)