Query= MSMg01no349_g19.b1 MSMg01no349_g19.b1 CHROMAT_FILE:
MSMg01no349_g19.b1 PHD_FILE: MSMg01no349_g19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:02 2005
(586 letters)
>mm_chr15_73383921_73384905
Length = 985
Score = 1019 bits (527), Expect = 0.0
Identities = 571/589 (96%), Gaps = 9/589 (1%)
Strand = Plus / Minus
Query: 5 gaattcaactaccagtacctgccaacacccaacctgtgtggttcacagacaactccagca 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gaattcaactaccagcacctgccaacacccaacctgtgtggttcacagacaactccagca 644
Query: 65 cgtcctcggagcccccatctgtaaactaggaaaccaaaggaggaagaacagaccctgccc 124
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 cgtcctcagagcccccatctgtaaactaggaaaccaaaggaggaagaacagaccctgccc 584
Query: 125 gctgccagctggttcctgcttacgcagaacctgtgtgtctccccaggcccagcctccctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gctgccagctggttcctgcttacgcagaacctgtgtgtctccccaggcccagcctccctg 524
Query: 185 tgcccagccttcagaggcccaggtctgaggtggacaaagtcccactgggttcacatcatc 244
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 523 tgtccagccttcagaggcccaggtctgaggtagacaaagtcccactgggttcacatcatc 464
Query: 245 gttcctgcgtggtaacagtgtcatggtgacgattgcctggtacatctgttttgctgccac 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 463 gttcctgcgtggtaacagtgtcatggtgacaattgcctggtacatctgttttgctgccac 404
Query: 305 tgtgtgatgggtaagctttacagccatgtgcaggctgtggaggatgtgagaggttccaaa 364
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tgtgtgatgggtaacctt-acagccatgtgcaggctgtggaggatgtgagaggttccaaa 345
Query: 365 aggat-aaggaaatttccaaataacaagggcagctgggggccacaggaaggtggtccaac 423
|| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 344 ag-attaaggaaatttccaaataacaagggcagctgggggccacaggaaggtggtctaac 286
Query: 424 aaggaagatctgtcatcagttaggtagtaccagaatgtatgcatgggaatgtccaccagg 483
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 285 aaggaagatctgtcatcagttaggtagtaccagaatgtatgcatgggtatgtccaccagg 226
Query: 484 tggcgccatttctaattcttt------atgctttactagtcaaagtagttgaacaatatg 537
||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 225 tggcgccatttctaattctttttctttatgctttactagtcaaagtagttgagcaatatg 166
Query: 538 tattttaaattttcttctcttcttttgcagagattgggggtgaacccag 586
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tattttaaattttcttctcttcttttgcagagattgggggtgaacccag 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 985
Length adjustment: 10
Effective length of query: 576
Effective length of database: 975
Effective search space: 561600
Effective search space used: 561600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_g19.g1 MSMg01no349_g19.g1 CHROMAT_FILE:
MSMg01no349_g19.g1 PHD_FILE: MSMg01no349_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:02 2005
(443 letters)
>mm_chr15_73212548_73213390
Length = 843
Score = 837 bits (433), Expect = 0.0
Identities = 442/447 (98%), Gaps = 4/447 (0%)
Strand = Plus / Plus
Query: 1 caagctagctaggactacattaaaaaccaaaaacaagggaggcagctaactgaaccttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagctagctaggactacattaaaaaccaaaaacaagggaggcagctaactgaaccttgg 260
Query: 61 aaaagaatcttaatggggcagtgtggaggtgggggtggggggccctgtctatattgtgct 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaagaatcttaatgggggagtgtggaggtgggggtggggggccctgtctatattgtgct 320
Query: 121 gtgctgaggacaggtctaagggataatatcataattgcttagctgaggtgggaagatgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgctgaggacaggtctaagggataatatcataattgcttagctgaggtgggaagatgcc 380
Query: 181 cactctgagtagcacaattcctaggcaaagagttctaaacactgtaagagtgagttgggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactctgagtagcacaattcctaggcaaagagttctaaacactgtaagagtgagttgggc 440
Query: 241 actagcatacatacattaattcagtgctctccaatgtaagtgact----gcttccaagtt 296
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 actagcatacatacattaattcagtgctctccaatgtaagtgactaactgcttccaagtt 500
Query: 297 cttgcccaataatgcactgtaacctggaattataggacaaagaaaccctttctgccctaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttgcccaataatgcactgtaacctggaattataggacaaagaaaccctttctgccctaa 560
Query: 357 actgcttttgttggcatattttatcacagcaaaagggcattaaaataacactgaggaaaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actgcttttgttggcatattttatcacagcaaaagggcattaaaataacactgaggaaaa 620
Query: 417 ggcgcagactataaagcttgatattta 443
|||||||||||||||||||||||||||
Sbjct: 621 ggcgcagactataaagcttgatattta 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
