Query= MSMg01no349_n07.b1 MSMg01no349_n07.b1 CHROMAT_FILE:
MSMg01no349_n07.b1 PHD_FILE: MSMg01no349_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:34 2005
(432 letters)
>mm_chr15_61653133_61653964
Length = 832
Score = 799 bits (413), Expect = 0.0
Identities = 425/429 (99%), Gaps = 1/429 (0%)
Strand = Plus / Plus
Query: 5 gaattcttatcaagttatctgaaatgcctcagcaatggtcagtggagccatgtgttcagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttatcaagttatctgaaatgcctcagcaatggtcagtggagccatgtgttcagg 264
Query: 65 attaccactgggccagggccttgatggagccatcagtgtgttaattcagaaaagatagct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attaccactgggccagggccttgatggagccatcagtgtgttaattcagaaaagatagct 324
Query: 125 cttttgaagctcacatgcttgcccagcccacacatgactaaaacacagagacttaagata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttttgaagctcacatgcttgcccagcccacacatgactaaaacacagagacttaagata 384
Query: 185 tgattttaaaacataggagactgagaatacatgtaggatgattaagaaatgacgtgtcga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgattttaaaacataggagactgagaatacatgtaggatgattaagaaatgacgtgtcga 444
Query: 245 agtgttttaatttttcaaagacagtaagagggaactgaagcatagataaaaaatgttcag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtgttttaatttttcaaagacagtaagagggaactgaagcatagataaaaaatgttcag 504
Query: 305 agatcaaagtgaagtcctattcaaagatttttaaattttctcaaaatcagacttttcaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agatcaaagtgaagtcctattcaaagatttttaaattttctcaaaatcagacttttcaag 564
Query: 365 gtctggacagaacaacttaatcataatttccattgata-gaagaagaagaagaagaagaa 423
| ||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||
Sbjct: 565 gcctggacagaacaacttattcataatttccattgataagaaggagaagaagaagaagaa 624
Query: 424 gaagaagaa 432
|||||||||
Sbjct: 625 gaagaagaa 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_n07.g1 MSMg01no349_n07.g1 CHROMAT_FILE:
MSMg01no349_n07.g1 PHD_FILE: MSMg01no349_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:34 2005
(531 letters)
>mm_chr15_61800561_61801491
Length = 931
Score = 853 bits (441), Expect = 0.0
Identities = 450/453 (99%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 1 ttgagaaaataactcctgaaatgcttgcagtgtttgttacagagtaagtgttccataaac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttgagaaaataactcctgaaatgcttgcagtgtttgttacagagtaagtgttccataaat 394
Query: 61 gctagttcctagtacttacatgcttccatgtttgtttcagtagctgtttccttagtccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gctagttcctagtacttacatgcttccatgtttgtttcagtagctgtttccttagtccca 334
Query: 121 tctctaccctattaggtcagtagacatatctttacatgaccagtgaaagggatagaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tctctaccctattaggtcagtagacatatctttacatgaccagtgaaagggatagaataa 274
Query: 181 aatgtagaggcagcgtttttagatgcaaacctttttgccatcaaatgtttttatcgacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aatgtagaggcagcgtttttagatgcaaacctttttgccatcaaatgtttttatcgacaa 214
Query: 241 agaaccctagagaagccaggtgtggtggggcaaagaggcagaagtaggtggatttctgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 agaaccctagagaagccaggtgtggtggggcaaagaggcagaagtaggtggatttctgtg 154
Query: 301 agtctatgccaacttggcatatagtgagacccattctt-aaaaaaaaaagtcccttgtga 359
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 153 agtctatgccaacttggcatatagtgagacccattcttaaaaaaaaaaagtcccttgtga 94
Query: 360 gatgggatagtgaagctatgtggcttatctgaatcagtttaggagaaaggtatccactga 419
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 gatgtgatagtgaagctatgtggcttatctgaatcagtttaggagaaaggtatccactga 34
Query: 420 gaaaacaataagaagtatccaaaaagatatttg 452
|||||||||||||||||||||||||||||||||
Sbjct: 33 gaaaacaataagaagtatccaaaaagatatttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
