Query= MSMg01no352_c17.b1 MSMg01no352_c17.b1 CHROMAT_FILE:
MSMg01no352_c17.b1 PHD_FILE: MSMg01no352_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:36 2005
(504 letters)
>mm_chr15_92855622_92856524
Length = 903
Score = 913 bits (472), Expect = 0.0
Identities = 490/496 (98%), Gaps = 1/496 (0%)
Strand = Plus / Plus
Query: 9 gaattcataggattccactaaaagaagtgaatgataagagaagctgaaataaaaaattca 68
||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 209 gaattcataggataaaaataaaagaagtgaatgataagagaagctgaaataaaaa-ttca 267
Query: 69 aaagggtagaccaaagagcattttttggtttgggttttgttttgttaaaaataagcagat 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aaagggtagaccaaagagcattttttggtttgggttttgttttgttaaaaataagcagat 327
Query: 129 attaagtttaaatcacagttggtttgaatatcagagcagcctaagtgaaaggaagttgtt 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 attaagtttaaatcacagttggtttgaatatcagagcagcctaagtgaaaggaagttgtt 387
Query: 189 tgttgacagtctgacagtgcctctcgataaggtacgggtccccacctttaataataacca 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgttgacagtctgacagtgcctctcgataaggtacgggtccccacctttaataataacca 447
Query: 249 acaatacatacaccacgagactcgcctctctttctaatattatggttaaaattgtgccgg 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 acaatacatacaccacgagactcgcctctctttctaatattatggttaaaattgtgccgg 507
Query: 309 ccaaatcaaatgcaattactgcttaaggcagaatggatggaaacccccagcctctgcaca 368
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ccgaatcaaatgcaattactgcttaaggcagaatggatggaaacccccagcctctgcaca 567
Query: 369 ttaaaaagattcagtggatgagggaaggaaggaggaagacgtaataatgtttttatgatt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ttaaaaagattcagtggatgagggaaggaaggaggaagacgtaataatgtttttatgatt 627
Query: 429 attacttgcattgttatcattcgggttattataattattagtatgataattactttttta 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 attacttgcattgttatcattcgggttattataattattagtatgataattactttttta 687
Query: 489 ttgatacttccttacg 504
||||||||||||||||
Sbjct: 688 ttgatacttccttacg 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 903
Length adjustment: 10
Effective length of query: 494
Effective length of database: 893
Effective search space: 441142
Effective search space used: 441142
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_c17.g1 MSMg01no352_c17.g1 CHROMAT_FILE:
MSMg01no352_c17.g1 PHD_FILE: MSMg01no352_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:37 2005
(441 letters)
>mm_chr15_93059503_93060342
Length = 840
Score = 797 bits (412), Expect = 0.0
Identities = 434/442 (98%), Gaps = 3/442 (0%)
Strand = Plus / Minus
Query: 1 ccaatgaggatagatgcagggacagtggcactcca-ggggggtggcaaggatcttgtggg 59
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 640 ccaatgaggatagatgcagggacagtggcaccccagggggggtggcaaggatcttgtggg 581
Query: 60 agcactcttccctagataagcactgcttaattaagaataattgaattgtagctcccgctc 119
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 580 agcactcttccctagataagcactgcctaattaagaataattgaattgtagctcccgctc 521
Query: 120 gtgaagctggtatcatttgtcttgttgatagtaactccagaacacacccacggtcgaatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gtgaagctggtatcatttgtcttgttgatagtaactccagaacacacccacggtcgaatt 461
Query: 180 aattaactggcagttatcagaagagggaaatcagcttgtgaggagagctggtggagctga 239
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 460 aattaactggcagttatcagaagagggaaatcagcttgtgagaagagctggtggagctga 401
Query: 240 tagcatctctgagtgacacccttgctgctgtgtgatatgccattgaacgaacgattgacc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tagcatctctgagtgacacccttgctgctgtgtgatatgccattgaacgaacgattgacc 341
Query: 300 cacactgacccccctgtgtccaatgtattggcctcattcccgttgtgatcaggtagaagc 359
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 340 cacactgacccccctgtgtccaatgtattggcctcattcccgttttgatcacgtagaagc 281
Query: 360 aaaagagacaaaacctaccctgcccctgtatgacccagcacatcacatatgacaaccaga 419
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aaaagagacaa--cctaccctgcccctgtatgacccagcacatcacatatgacaaccaga 223
Query: 420 ggaaaccaaaagtaacaaggtc 441
||||||||||||||||||||||
Sbjct: 222 ggaaaccaaaagtaacaaggtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 840
Length adjustment: 9
Effective length of query: 432
Effective length of database: 831
Effective search space: 358992
Effective search space used: 358992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
