NNNTTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCATTGTAGTAGAGTCAGAGGATGGGAGGATATGTACCA
AAAAGAAGTCTTTAGGACATGATGCAGACACTTGTTGGGAGCTATTAAGA
CAACTCTAGTGTCTTGATCTCTGAATTGGGCCTCTCCCCCGAGAAGAAAA
GGGTGTCAAAAGTGGGCCACCAACACACTGTTCTGAGAACAACCACAGAA
TGTTCCAGCCCTAAGTCAGTGCCAGATGTCCTGACCACACCCTGATACCA
CCAAGTTCCTGCTTCCCCGTGTAGCTGCCAAAAGAAAAATTTCCACTGCC
CCGCCCCTCCTGCTGAGAAGTATTTCCTCTTTTGCTTGTGCATTTAACCC
TTGAGCCTTGCTGAATACAGTGACACCTTGATGCTACTCAGACTGCTTCC
GCCCGCCGTGTTGTTCCTGCACTTGGTGTCTGTCTCTCCCTCCCCCCATT
TGGTTCTTAGGAGAAGGTCCTCTCGAGACCCTTGAATAACTGGACCTGCT
GGACCAGTCAGACACTGCTCACTAACTCACTGGGGCGCACAAGACTGTGC
CCCTCAAAGTGTCATCATGGAGGTGGGAGGGGCTCATAGGACTCCGCCCC
GGCCGGGGGCGACTATTGAGAGTTAATTGTACTAAGTGAAGAGGAAAACT
TTTTTTTTTTCTGGGAAACCCCCGGATAAAAGATGGGGTTTTGTTCCCAA
AAAAATCCC

NNNNNAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACAGAACAGGCAAAA
CAATTCATTTAGTAATTTTCAAGTGGCAGTGGTTGCTTTTACTGTAGTAG
CATAAAGAATGTCCTCGGAAGGACTCTGTATGTTGTGAGAGGTTTCTGAA
GTGGAAGTGAGGACAGAAATTGCTGATTCATTATGGAGTGCTCCTTAAGC
TCAAATAGATTGTGCTATGAGCACCACAAAGGCACTCCAGCCTAACTCCC
ACCACGAGAATGCTAGAGAGCTTGTTAACTCTCATCCTTTTAGCAATGGG
ATTGACTGGGTTTCCTAACCTTTGCCAATCTGATTGGTAAGAAATGATAT
GCTAGTTTTTTTAAAAAATTTCAAAACTTTATTTTTCAGTAACTGTTAGC
GATTCATAAATTCCCCATTAAGTTACAGAATGTAAAGTGTCGCAGTGGAT
GTTTTCCACAGCCCAGTGAAGCAGTGTGAAACACATGGCAGGTGTCTGAG
ATACACGCTAGAGGTCTAAACTTAAAACACTCCAACTGATCAAAGCTTTT
TCATTTTCCTGGACCTCACTATATATATTTTTAGATTTCACAAAGAAAAA
ATTAAATGTAATTTTCTCTTTCTTGTTCCCAGAAAAATTTATTATCACCT
TTTTCAACCAGGTTGTTTAAAGTCTGAAAAACTCCTGAATTAATAACACA
CCCGGGCACCCTTTTTT

Query= MSMg01no353_d15.g1 MSMg01no353_d15.g1 CHROMAT_FILE:
MSMg01no353_d15.g1 PHD_FILE: MSMg01no353_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:02 2005
         (500 letters)



>mm_chr15_38756431_38757330
          Length = 900

 Score =  899 bits (465), Expect = 0.0
 Identities = 492/501 (98%), Gaps = 2/501 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacagaacaggcaaaacaattcatttagtaattttcaagtggcagtggttgcttttactg 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 cacagaacaggcaaaacaattcatttagtaattttcaagtggcagcggttgcttttactg 260

                                                                       
Query: 61  tagtagcataaagaatgtcctcggaaggactctgtatgttgtgagaggtttctgaagtgg 120
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 tagtagcataaagaatgtcctcggaaggactctgtgtgttgtgagaggtttctgaagtgg 320

                                                                       
Query: 121 aagtgaggacagaaattgctgattcattatggagtgctccttaagctcaaatagattgtg 180
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 aagtgaggacagaaattgctgattcattatggagtgctccttaagctcgaatagattgtg 380

                                                                       
Query: 181 ctatgagcaccacaaaggcactccagcctaactcccaccacgagaatgctagagagcttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctatgagcaccacaaaggcactccagcctaactcccaccacgagaatgctagagagcttg 440

                                                                       
Query: 241 ttaactctcatccttttagcaatgggattgactgggtttcctaacctttgccaatctgat 300
           ||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 ttaacacacatccttttagcaatgggattgacggggtttcctaacctttgccaatctgat 500

                                                                       
Query: 301 tggtaagaaatgatatgctagtttttttaaaaaatttcaaaactttatttttcagtaact 360
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 tggtaagaaatgatatgctagtttttt-aaaaaatttcaaaactttatttttcagtaact 559

                                                                       
Query: 361 gttagcgattcataaattccccattaagttacagaatgtaaagtgtcgcagtggatgttt 420
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 560 gttagcgattcataaattccccattaagttacagaatgtaaagtgttgcagtggatgttt 619

                                                                       
Query: 421 tccacagcccagtgaagcagtgtgaa-acacatggcaggtgtctgagatacacgctagag 479
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 620 tccacagcccagtgaagcagtgtgaagacacatggcaggtgtctgagatacacgctagag 679

                                
Query: 480 gtctaaacttaaaacactcca 500
           |||||||||||||||||||||
Sbjct: 680 gtctaaacttaaaacactcca 700


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space:   436100
Effective search space used:   436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)