Query= MSMg01no353_e22.b1 MSMg01no353_e22.b1 CHROMAT_FILE:
MSMg01no353_e22.b1 PHD_FILE: MSMg01no353_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:08 2005
(383 letters)
>mm_chr15_12132730_12133515
Length = 786
Score = 555 bits (287), Expect = e-162
Identities = 316/333 (94%), Gaps = 13/333 (3%)
Strand = Plus / Minus
Query: 4 ggaattccctagactctgcaacagtgagaagcaattttgtattgtgtataaacgatcaac 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggaattccctagactctggaacagtgagaagcaattttgtattgtgtataaacgatcaac 274
Query: 64 tgtaaggtactctgttacaagcagaggtatgagta---cactcatacatgtttcactcac 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 273 tgtaaggtactctgttacaagcagaggtatgagtacaccactcatacatgtttcactcac 214
Query: 121 tgataaacactttttttcttttttc----------tttcttttttttttttttttttttt 170
||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 213 tgataaacactttttttcttttttcttttttttttttttttttttttttttttttttttt 154
Query: 171 ttgggttttcgagacagggtttctctgtgtagctctggctgtcctggtactcactctata 230
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 153 ttggtttttcgagacagggtttctctgtgtagctctagctgtcctggtactcactctata 94
Query: 231 gaccaggctggcctcgaactcagaaatctgcctgcctctgcctcccaagtgctgggatta 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 gaccaggctggcctcgaactcagaaatctgcctgcctctgcctcccaagtgctgggatta 34
Query: 291 aaggcgtgtgccaccactgcctgtttaaacact 323
|||||||||||||||||||||||||||||||||
Sbjct: 33 aaggcgtgtgccaccactgcctgtttaaacact 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 786
Length adjustment: 9
Effective length of query: 374
Effective length of database: 777
Effective search space: 290598
Effective search space used: 290598
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_e22.g1 MSMg01no353_e22.g1 CHROMAT_FILE:
MSMg01no353_e22.g1 PHD_FILE: MSMg01no353_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:08 2005
(434 letters)
>mm_chr15_11997950_11998783
Length = 834
Score = 839 bits (434), Expect = 0.0
Identities = 434/434 (100%)
Strand = Plus / Plus
Query: 1 aaagcatactgtagaaggagatagactctttacatcaaaaccaagtgtcctccgtcccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagcatactgtagaaggagatagactctttacatcaaaaccaagtgtcctccgtcccta 260
Query: 61 ctcagtttttactgcaagtttgaggacttaaaaaaaattagaagacagttaggaaaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcagtttttactgcaagtttgaggacttaaaaaaaattagaagacagttaggaaaggga 320
Query: 121 gagaggcccaggcacagtgcttgcctggcatgctggactaaacatttacaactcctagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagaggcccaggcacagtgcttgcctggcatgctggactaaacatttacaactcctagtg 380
Query: 181 aggcaaatattggggggagggggaaacaagccaaggaaggagcagcaatctgtcttaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggcaaatattggggggagggggaaacaagccaaggaaggagcagcaatctgtcttaaac 440
Query: 241 cattcaaaactgcacgcctgcacacaaaggtaggaaacctggaagaaagtccttaaagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattcaaaactgcacgcctgcacacaaaggtaggaaacctggaagaaagtccttaaagca 500
Query: 301 gagaagaaaaaaggcccaaatcttcagctctcttgaggaccctctgaggaagactgccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagaagaaaaaaggcccaaatcttcagctctcttgaggaccctctgaggaagactgccca 560
Query: 361 gactctgtctgcacttcatcagaaagccatgtgcaggctgcatcagacagttatttcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gactctgtctgcacttcatcagaaagccatgtgcaggctgcatcagacagttatttcctt 620
Query: 421 tccaacgggggtgg 434
||||||||||||||
Sbjct: 621 tccaacgggggtgg 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
