Query= MSMg01no354_e12.b1 MSMg01no354_e12.b1 CHROMAT_FILE:
MSMg01no354_e12.b1 PHD_FILE: MSMg01no354_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:23 2005
(446 letters)
>mm_chr15_35957505_35958350
Length = 846
Score = 828 bits (428), Expect = 0.0
Identities = 438/442 (99%)
Strand = Plus / Plus
Query: 5 gaattcttccatctactaagtttcagcaaggagagatgccatctgaccctcatccctaag 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gaattcttccatctagtaagtttcagcaaggagagatgccatctgaccctcatccctaag 148
Query: 65 agagatgccatctgaccctcatccccaagagagatgccatctgaccctcattcctaagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 agagatgccatctgaccctcatccccaagagagatgccatctgaccctcattcctaagag 208
Query: 125 agatgccgtctgacccgcatccctatgagagatgccatctgaccctcatccccaagagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agatgccgtctgacccgcatccctatgagagatgccatctgaccctcatccccaagagag 268
Query: 185 atgccgtctgaccctcatccccaagagagatgccgtctgaccctcatccccaagagagat 244
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 269 atgccgtctgaccctcatccccaagagagatgccgtctgaccctcatccctaagagagat 328
Query: 245 gccgtctgacccgcatccctatgagagatgccatctgaccctcatccctaagagtgatgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gccgtctgacccgcatccctatgagagatgccatctgaccctcatccctaagagtgatgc 388
Query: 305 catttgacctgcaaccctatgagagatgctgtttgacccttgtcactaacatcctgggct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 catttgacctgcaaccctatgagagatgctgtttgacccttgtcactaacatcctgggct 448
Query: 365 atccatcacaattctactcatcttcttgaatgtgccccgtttgcccatcatctgtctctc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atccatcacaattctactcatcttcttgaatgtgccccgtttgcccatcatctgtctctc 508
Query: 425 tttananactgtatgtctgaaa 446
|||| | |||||||||||||||
Sbjct: 509 tttagatactgtatgtctgaaa 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 4
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_e12.g1 MSMg01no354_e12.g1 CHROMAT_FILE:
MSMg01no354_e12.g1 PHD_FILE: MSMg01no354_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:23 2005
(538 letters)
>mm_chr15_36149971_36150908
Length = 938
Score = 876 bits (453), Expect = 0.0
Identities = 479/495 (96%), Gaps = 15/495 (3%)
Strand = Plus / Minus
Query: 52 gtaacccggctgtgcttctgtgctcttcttagatgcagaaaacacgcagtccatataaac 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 gtaacccggctgtgcttctgtgctcttcttagatgcagaaaacacgcagtccatataaac 879
Query: 112 tgaaatgtttccaaagggttttcaaagttggcattgattacataagtacaccattttctt 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 tgaaatgtttccaaagggttttcaaagttggcattgattacataagtacaccattttctt 819
Query: 172 ttcctttttctgtgtttgtgttttgagacagggtttctctgtgcagccctggctgacctg 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 ttcctttttctgtgtttgtgttttgagacagggtttctctgtgcagccctggctgacctg 759
Query: 232 gagctccctttgttttttt-------gcactgcccacaactgggaaggctgactgctaac 284
||||||||| || | ||||||||||||||||||||||||||||||||||
Sbjct: 758 gagctccctctg------taccccaggcactgcccacaactgggaaggctgactgctaac 705
Query: 285 cactgggctgcacttgttagttaggtctatgattacacatactgttattttaaaagtttt 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 cactgggctgcacttgttagttaggtctatgattacacatactgttattttaaaagtttt 645
Query: 345 atatttatatacagatgattataatatacaggattctctctatagtttcttatacagaaa 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 atatttatatacagatgattataatatacaggattctctctatagtttcttatacagaaa 585
Query: 405 tttccatctaaactgtagctataataactacatctccttggctgagtgtgaaaatataaa 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tttccatctaaactgtagctataataactacatctccttggctgagtgtgaaaatataaa 525
Query: 465 tttgaaagttaatgtctaatcaaccacaactgtagaagaaaaagatttttgaaa-gaggg 523
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 524 tttgaaagttaatgtctaatcaaccacaactgtagaagaaaaagatttt-gaaaagaggg 466
Query: 524 attttaaagcgaaat 538
|||||||||||||||
Sbjct: 465 attttaaagcgaaat 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
