Query= MSMg01no354_h07.b1 MSMg01no354_h07.b1 CHROMAT_FILE:
MSMg01no354_h07.b1 PHD_FILE: MSMg01no354_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:36 2005
(246 letters)
>mm_chr15_10521495_10522139
Length = 645
Score = 435 bits (225), Expect = e-126
Identities = 237/241 (98%), Gaps = 1/241 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaaaaccttctattatcaaaaatctctcaggatgctggtatgtgaaagaaaata 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggaattcaaaaccttctattatcaaaaatctctcaggatgctggtatgtgaaagaaaata 316
Query: 64 gccgaggttatttttaattcatccactcgttttccccaaaaggataaaggaatttgtgca 123
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 315 gccgaggttatttttaattcatccactctttttccccaaaaggataaaggaatttgtgca 256
Query: 124 atatgatacgttttattatttttaaacatatgcttaaagatagttttaaatgttgtgtgt 183
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 255 atatgatacattttattatttt-aaacatatgcttaaagatagttttaaatgttgtgtgt 197
Query: 184 ggtgatgtgtgtgtatgtgtctttgtgagtgtgagtgtgtgtatgtgtgtgtgtgtgtgt 243
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 196 ggtgatgtgtgtgtatgtgtctttgtgagtgtgagtgtgtgtatgtgtttgtgtgtgtgt 137
Query: 244 g 244
|
Sbjct: 136 g 136
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 645
Length adjustment: 9
Effective length of query: 237
Effective length of database: 636
Effective search space: 150732
Effective search space used: 150732
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no354_h07.g1 MSMg01no354_h07.g1 CHROMAT_FILE:
MSMg01no354_h07.g1 PHD_FILE: MSMg01no354_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:36 2005
(505 letters)
>mm_chr15_10339293_10340201
Length = 909
Score = 932 bits (482), Expect = 0.0
Identities = 502/512 (98%), Gaps = 7/512 (1%)
Strand = Plus / Plus
Query: 1 catccttcaggggaagtatctatcactggctcacagagt----ctcagtttgtgtagatt 56
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 catccttcaggggaagtatctatcactggctcacagagtaagtctcagtttgtgtagatt 260
Query: 57 agtctgggctaatgttatttcccattgtatcaactggtttgaatacacagtatatgtgtc 116
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 agtctgggctaatgttatttcccattatatcaactggtttgaatacacagtatatgtgtc 320
Query: 117 tcccatgagtcgtgaaggaaactctttctgtgccactacctctgaagaaacatttcttca 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccatgagtcgtgaaggaaactctttctgtgccactacctctgaagaaacatttcttca 380
Query: 177 ggcttcagctcaaatgcctcttgtcacactggaaattgtgtggaaaatgatggggtttct 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcttcagctcaaatgcctcttgtcacactggaaattgtgtggaaaatgatggggtttct 440
Query: 237 cacttcacaccaggcatctggaagccatgaagataaagcctagtcactatgctacatctg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacttcacaccaggcatctggaagccatgaagataaagcctagtcactatgctacatctg 500
Query: 297 gaaagtggtcggaagctgagtggttggtaatgtcaatgagtcactgaccatgaatcctgg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaagtggtcggaagctgagtggttggtaatgtcaatgagtcactgaccatgaatcctgg 560
Query: 357 agccaccctacctcagggtttcttgatttatgaaataataaattcatggtgatgcttaca 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agccaccctacctcagggtttcttgatttatgaaataataaattcatggtgatgcttaca 620
Query: 417 acttttaatattttccattattgcagcccaaggcatttgggaaacaatgcaaaaaatatc 476
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 acttttaatattttccgttattgcagcccaaggcatttgggaaacaatgcagaaaatatc 680
Query: 477 ttttttttt---ctagtgtggtcagcatcatc 505
||||||||| ||||||||||||||||||||
Sbjct: 681 ttttttttttttctagtgtggtcagcatcatc 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 909
Length adjustment: 10
Effective length of query: 495
Effective length of database: 899
Effective search space: 445005
Effective search space used: 445005
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
