NTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTTACTTCTGAGCCCCATTTTTTAATGGGGTTGTTTGA
TTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTC
CCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGT
CTCTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTT
CATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTG
TTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCC
ACTTTCTCCTCTATAAGTTTCAGTGTCTCGGGTTTTATGTGAAGTTCTTT
GATCCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTC
GCANTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAC
ATGCTGTCNTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAATATCAA
GTGACCATAGGTGTGCGGGTTCATTTCTGGGTCTTCAATTCTATTCCATT
GGNCTANTTGTCTGTCTCTATACCAGTACCATGCAGCTTTTANANATTTT
GGNCTGTAATATTACTTTATTTCTGTTCCGGTGATTCCACGTGAGGTTCN
TGTATCTGGGAAAGATTTCTTGCTACCCTATTTTTTTTGTTA

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAGAGTACCAGGAGCTCTGGAGATACC
ATTCCACAATTCTCTAAGATGACTCAAAAGACACAATGTAGACTCTGACT
TAGACTTTGTTATGGAAAAGGGATATAAAACAAACCCACAAAAAGCAAAA
GCAAAGGATGAGGTCCAGAGGAAGCTGTGGGTAAGCGTCTGAGCTTTCTT
CTCCTGCAGAGTCATTGGGAAGCACTAAAGGGCTGTGCCTCCTCTCTGGA
AAAGTCCACCTGGAACTTTCAGGAGAGGCTGCATTCGATAACCACAGAGT
AATTGCTTCCTCTAAGATTGGGAATTAAAATAAGTATTCCATTGTTGTCA
TTTTATTAAAAATTCTACTCAGGTTTCTAGATCAGGCAACTGGATAAGAA
CAGCATATAAAAATGCCCAAATCAAAAGGGAAAAATGTATCCTTATCTTC
GCAAAGAACATGATAAAGTTAGAAAGATCCACTGTAACTATTTTATATTA
ACAGTTTTCTGTTACTGTAACAAAATACCCAAGCCTGAGAAATCACAAGG
CAAAGAAGTTCATTTTGCTAGAGGCTGAAATTCTATTGATTTGNTCACTT
GGAGAAGATCCACAGTGGATGGCCTCAAAATGGTGAGAGAAAGTGAGGGA
AGGAGAGACATGGTTTCTTGTTCCATGACACAAAATGAAGTATGTGTGTG
TGTGGCTGTG

Query= MSMg01no354_j13.g1 MSMg01no354_j13.g1 CHROMAT_FILE:
MSMg01no354_j13.g1 PHD_FILE: MSMg01no354_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:47 2005
         (548 letters)



>mm_chr15_42206799_42207746
          Length = 948

 Score =  903 bits (467), Expect = 0.0
 Identities = 479/483 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagagtaccaggagctctggagataccattccacaattctctaagatgactcaaaagaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cagagtaccaggagctctggagataccattccacaattctctaagatgactcaaaagaca 424

                                                                       
Query: 61  caatgtagactctgacttagactttgttatggaaaagggatataaaacaaacccacaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 caatgtagactctgacttagactttgttatggaaaagggatataaaacaaacccacaaaa 364

                                                                       
Query: 121 agcaaaagcaaaggatgaggtccagaggaagctgtgggtaagcgtctgagctttcttctc 180
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 363 agcaaaagcaaaggatgaggtccagagaaagctgtgggtaagcgtctgagctttcttctc 304

                                                                       
Query: 181 ctgcagagtcattgggaagcactaaagggctgtgcctcctctctggaaaagtccacctgg 240
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cagcagagtcattgggaagcactaaagggctgtgcctcctctctggaaaagtccacctgg 244

                                                                       
Query: 241 aactttcaggagaggctgcattcgataaccacagagtaattgcttcctctaagattggga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aactttcaggagaggctgcattcgataaccacagagtaattgcttcctctaagattggga 184

                                                                       
Query: 301 attaaaataagtattccattgttgtcattttattaaaaattctactcaggtttctagatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 attaaaataagtattccattgttgtcattttattaaaaattctactcaggtttctagatc 124

                                                                       
Query: 361 aggcaactggataagaacagcatataaaaatgcccaaatcaaaagggaaaaatgtatcct 420
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 123 aggcaactggataagaacagcaaataaaaatgcccaaatcaaaagggaaaaatgtatcct 64

                                                                       
Query: 421 tatcttcgcaaagaacatgataaagttagaaagatccactgtaactattttatattaaca 480
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  tatcttcacaaagaacatgataaagttagaaagatccactgtaactattttatattaaca 4

              
Query: 481 gtt 483
           |||
Sbjct: 3   gtt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)