Query= MSMg01no355_c11.b1 MSMg01no355_c11.b1 CHROMAT_FILE:
MSMg01no355_c11.b1 PHD_FILE: MSMg01no355_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:31 2005
(496 letters)
>mm_chr15_90070547_90071442
Length = 896
Score = 893 bits (462), Expect = 0.0
Identities = 486/494 (98%), Gaps = 2/494 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaaatatagaaacggaacatcagtctaaaaatttaaggcgggaaggagatgata 63
|||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 696 ggaattcaaataaagaaacggaacatcagtctaaaaattaaaggcaggaaggagatgata 637
Query: 64 gaacagcgaatatcactaccagaaatttagcttgccctaccgcaacactacacttcagaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gaacagcgaatatcactaccagaaatttagcttgccctaccgcaacactacacttcagaa 577
Query: 124 aatcctccagtcgtgttgctctgccattcaaagaagttttctgcagtctggaacagcagt 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aatccttcagtcgtgttgctctgccattcaaagaagttttctgcagtctggaacagcagt 517
Query: 184 ccaccagctaccacatcacttccttgcatccaaatcactggtttatacttcttgtacaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ccaccagctaccacatcacttccttgcatccaaatcactggtttatacttcttgtacaaa 457
Query: 244 attttcctggtatttctttttgttttaaatttccttt-aaaaaatgcagtaaaataaata 302
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 456 attttcctggtatttctttttgttttaaatttcctttaaaaaaatgcagtaaaataaata 397
Query: 303 ttttttgtggagttggtaactactgcccatacaaagaacaagaaacaatacaaagctcac 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 -tttttgtggagttggtaactactgcccatacaaagaacaagaaacaatacaaagctcac 338
Query: 363 aggaggcctaaggattcaatatacatttaaaacatgtttatgggtatggcacctctgtgg 422
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aggaggtctatggattcaatatacatttaaaacatgtttatgggtatggcacctctgtgg 278
Query: 423 gtgcctgcagtgtctaggaaaggctatgatcacctggatgaagttagcggtgagccacct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gtgcctgcagtgtctaggaaaggctatgatcacctggatgaagttagcggtgagccacct 218
Query: 483 gacaggcaagcact 496
||||||||||||||
Sbjct: 217 gacaggcaagcact 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_c11.g1 MSMg01no355_c11.g1 CHROMAT_FILE:
MSMg01no355_c11.g1 PHD_FILE: MSMg01no355_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:32 2005
(301 letters)
>mm_chr15_89866279_89866979
Length = 701
Score = 551 bits (285), Expect = e-161
Identities = 297/301 (98%)
Strand = Plus / Plus
Query: 1 ctaggagctcacttcttttttttcattggtttgaacacctaggtcgttctaaaaaaaatt 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaggagctcacttcttctttttcattggtttgaacacctaggtcgttctaaaaaaaatt 260
Query: 61 gttttaaggtcggatcttggtaaatttttattaggagtaaacacagagatcaggagataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttttaaggtcggatcttggtaaatttttattaggagtaaacacagagatcaggagataa 320
Query: 121 catagtagaataaacgcaaagtgtgtaaaggaaaataaataaagtgaataattttctagt 180
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 321 catagtagaataaacgcaaagtgtgtaaaggaaaacaaataaactgaataattttctagt 380
Query: 181 gattctcacaggtgtccttgaagccagaactggtttgatatgcagtaggtaacctagtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattctcacaggtgtccttgaagccagaactggtttgatatgcagtaggtaacctagtgt 440
Query: 241 acatgtggtattgaatgtgttgaatgtgtagggtatatttgtaggatatgagatagatta 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 acatgtggtattgaatgtgttgaatgtgtagggtatatttgtagaatatgagatagatta 500
Query: 301 t 301
|
Sbjct: 501 t 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 701
Length adjustment: 9
Effective length of query: 292
Effective length of database: 692
Effective search space: 202064
Effective search space used: 202064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
