Query= MSMg01no355_l19.b1 MSMg01no355_l19.b1 CHROMAT_FILE:
MSMg01no355_l19.b1 PHD_FILE: MSMg01no355_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:16 2005
(419 letters)
>mm_chr15_41560423_41561241
Length = 819
Score = 768 bits (397), Expect = 0.0
Identities = 409/413 (99%), Gaps = 1/413 (0%)
Strand = Plus / Plus
Query: 5 gaattccttcatccactagcagaactctcagttaacctacaagtgcaaaaatgattcctc 64
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 205 gaattccttcatccactagcaaaactctcaattaacctacaagtgcaaaaatgattcctc 264
Query: 65 tgggtcttggttttaactacttggcgtactgtcaaggaaagaatgaacagtaaactttat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgggtcttggttttaactacttggcgtactgtcaaggaaagaatgaacagtaaactttat 324
Query: 125 ttaaaaagttcaaataatatataaaaatattcagacaaaatataaatacagttaatacca 184
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttaaaaagttcaaatcatatataaaaatattcagacaaaatataaatacagttaatacca 384
Query: 185 aagaaaaagattaatataaatgagtgtgctaatgactcccaaatgtgttggctttgtgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagaaaaagattaatataaatgagtgtgctaatgactcccaaatgtgttggctttgtgtc 444
Query: 245 tttatctgttttataatatcctaatttgggggatactttatgaaaacaaccagctgtgta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttatctgttttataatatcctaatttgggggatactttatgaaaacaaccagctgtgta 504
Query: 305 ggacagacaggattttctgcaagttcttcaccttaagaattcagaaaaatgtgggtgagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggacagacaggattttctgcaagttcttcaccttaagaattcagaaaaatgtgggtgagc 564
Query: 365 gggtgggtgagcaccctcatagaagcagggggggg-tggaggttgagataggg 416
||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 565 gggtgggtgagcaccctcatagaagcagggggggggtggaggttgagataggg 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_l19.g1 MSMg01no355_l19.g1 CHROMAT_FILE:
MSMg01no355_l19.g1 PHD_FILE: MSMg01no355_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:16 2005
(497 letters)
>mm_chr15_41757294_41758190
Length = 897
Score = 611 bits (316), Expect = e-179
Identities = 331/336 (98%)
Strand = Plus / Minus
Query: 1 ctactaccagacttctttgtgtaagactaagctaggcaaatagtagaaggctagtagaga 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 336 ctactaccagacttctttgtgtaagactaagctaggcaaatggtagaaggctattagaga 277
Query: 61 aaatgtatatgctcttcaccaatgtagctatatgactgtggccttctgcatgctggatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaatgtatatgctcttcaccaatgtagctatatgactgtggccttctgcatgctggatgg 217
Query: 121 ttattatccttataagagtggttctggtatcttcaagcacattcagatcatctggaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ttattatccttataagagtggttctggtatcttcaagcacattcagatcatctggaaagc 157
Query: 181 ctctaaaatatactaataccaagcaagcacagacaaattacatttaaacaactcagaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ctctaaaatatactaataccaagcaagcacagacaaattacatttaaacaactcagaaag 97
Query: 241 tgcccaggtgtttttgaaagcccctttaatgattctaatgtgcaattaagtaaatttctg 300
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 96 ggcccaggtgtttttgaaagcccctttaatgattctaatgtgcaattaggtaaatttctg 37
Query: 301 acttaaattatttttatgtctagccagccctaaaaa 336
||||||||||||||||||||||||||| ||||||||
Sbjct: 36 acttaaattatttttatgtctagccagacctaaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
