Query= MSMg01no356_f04.b1 MSMg01no356_f04.b1 CHROMAT_FILE:
MSMg01no356_f04.b1 PHD_FILE: MSMg01no356_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:01 2005
(550 letters)
>mm_chr15_89664317_89665266
Length = 950
Score = 934 bits (483), Expect = 0.0
Identities = 531/547 (97%)
Strand = Plus / Plus
Query: 4 ggaattcattaataaatgtgatgaataaattgtatttgccaatattgctgacactcaaca 63
||||||| || |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 204 ggaattcgtttataaatgtgatgaataaattgtatttgcgattattgctgacactcaaca 263
Query: 64 ttttgcacagaaagctgcacagagcaatagctaatggatcttacgttactatgaattctc 123
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttttgcacagaaagctgtacagagcaatagctaatggatcttacgttactatgaattctc 323
Query: 124 tttagaaagaaccgaggccccacttccctctgtgacactgtcagcaaatggccaaccaac 183
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 324 tttagaaagaaccgaggccccatttccctctgtgacactgtcagcagatggccaaccaac 383
Query: 184 aagtgcgtcatggattctgaattaagaacctccttgtaagaattggactcagaattttag 243
|||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 384 aagtgcatcatggattctgaattcagaacctacttgtaagaattggactcagaattttag 443
Query: 244 ctgtaagccctgaggtgtatctcagtggtcaggagtgtttgcccgatatacagaagacct 303
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 444 ctgtaagccctgaggtgtatctcagtggtcaggactgtttgcccgatatacagaagacct 503
Query: 304 tgggttcggctcccaacactgtgaaggaaaagataaagacgttaagtatcaaaattactt 363
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 504 tgggttcggttcccaacactgtgaaggaaaagataaagacgttaagtatcagaattactt 563
Query: 364 aaatctacttatttctcttggatttttccccttttagggaagtgatatgtgatttaaaaa 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaatctacttatttctcttggatttttccccttttagggaagtgatatgtgatttaaaat 623
Query: 424 ttgtttaagcttaaaggatgtctttctatacatatgatataaaaatttcacgtgaataga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgtttaagcttaaaggatgtctttctatacatatgatataaaaatttcacgtgaataga 683
Query: 484 gagcaccgaactcccacacctaaggctcgggaatactgcagaagggggtggggcagcaaa 543
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 684 gagcaccgaactcctacacctaaggatcgggaatactgcagaagggggtggggcagcaaa 743
Query: 544 cgctaag 550
|||||||
Sbjct: 744 cgctaag 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_f04.g1 MSMg01no356_f04.g1 CHROMAT_FILE:
MSMg01no356_f04.g1 PHD_FILE: MSMg01no356_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:01 2005
(171 letters)
>mm_chr15_89875426_89875994
Length = 569
Score = 302 bits (156), Expect = 9e-87
Identities = 166/170 (97%), Gaps = 2/170 (1%)
Strand = Plus / Minus
Query: 1 aagttctgcttgcaattacacgctggaggaaggtaggccagggggcctggtgcagccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aagttctgcttgcaattacacgctggaggaaggtaggccagggggcctggtgcagccaca 309
Query: 61 gaagagaaaggggtcaggggagatctcttgccatgcccacagtttacctcagatgacgca 120
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 308 gaaaagaaaggggtcaggggagatctcgtgccatgcccacagtttacctcagatgacgca 249
Query: 121 ggcttctcctggcttttgtgtcatcttttctgttacattnngcaacactg 170
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 248 ggcttctcctggcttttgtgtcatcttttctgttacatt--gcaacactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 569
Length adjustment: 8
Effective length of query: 163
Effective length of database: 561
Effective search space: 91443
Effective search space used: 91443
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
