Query= MSMg01no356_k06.b1 MSMg01no356_k06.b1 CHROMAT_FILE:
MSMg01no356_k06.b1 PHD_FILE: MSMg01no356_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:25 2005
(490 letters)
>mm_chr15_32063624_32064512
Length = 889
Score = 872 bits (451), Expect = 0.0
Identities = 472/479 (98%), Gaps = 1/479 (0%)
Strand = Plus / Plus
Query: 6 aatttattgatcatctcgagttacacatttgtgtacagccacctttatctttattattgt 65
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aatttattgatcagctggagttacacatttgtgtacagccacctttatctttattattgt 265
Query: 66 agagttttctcctttccagaactttctcaagctcctccagtgttggtgcattggtgtcac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 agagttttctcctttccagaactttctcaagctcctccagtgttggtgcattggtgtcac 325
Query: 126 ggttgtctcctttaatcagaggccaagttcctacctggcatgtcccaacgtcctacagtt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggttgtctcctttaatcagaggccaagttcctacctggcatgtcccaacgtcctacagtt 385
Query: 186 ctttttcggaatttgcacacaccaaggttgattccttctaaagtgtgaatcttgacaaag 245
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctttttcggaattttcacacaccgaggttgattccttctaaagtgtgaatcttgacaaag 445
Query: 246 gtgtaatgttctctatttgctagtagtgaaccacagatctctcatgtagctgctctgagt 305
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 446 gtgtaatgttctctatttgctagtagtgaaccacagagc-ctcatgtagctgctctgagt 504
Query: 306 gtctgaagtgcccgacactgtcatccttcccttccttcccttgaccacgagtaaccgctg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtctgaagtgcccgacactgtcatccttcccttccttcccttgaccacgagtaaccgctg 564
Query: 366 gtaaccatttttactgggtttgtcattaaaaaaaaatcctacaatgtatttgtcacaata 425
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ataaccatttttactgggtttgtcattaaaaaaaaatcctacaatgtatttgtcacaata 624
Query: 426 gaaagattggcttctttcagttgtccatatagattaggggtcctcacactttttttttt 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaaagattggcttctttcagttgtccatatagattaggggtcctcacactttttttttt 683
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 889
Length adjustment: 10
Effective length of query: 480
Effective length of database: 879
Effective search space: 421920
Effective search space used: 421920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_k06.g1 MSMg01no356_k06.g1 CHROMAT_FILE:
MSMg01no356_k06.g1 PHD_FILE: MSMg01no356_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:26 2005
(266 letters)
>mm_chr15_32116189_32116859
Length = 671
Score = 451 bits (233), Expect = e-131
Identities = 260/271 (95%), Gaps = 5/271 (1%)
Strand = Plus / Minus
Query: 1 agaatgatgctctttggcatgacttattaatttatactctggatggtaaagaaaaatcta 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 agaatgatggtctttggcatgacttattaatttatactctggatggtaaagaaaaatcta 412
Query: 61 attcaacgtgcagaacttctattcttgttgcccacggtcagcatgcacat----ggcctg 116
||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 411 attcaacgtgcagaacttctattcttgctgcccacggtcagcatgcacatacatggcctg 352
Query: 117 ctcaggtatttgcagtctggatcacagaggcagaagctatccagtgcagggagtgagtga 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ctcaggtatttgcagtctggatcacagaggcagaagctatccagtgcagggagtgagtga 292
Query: 177 agttctgagtgaa-gtgtgttgctgacagggatgtcactgtgtcaaggaccccagtgcct 235
||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 291 agttctgagtgaatgtgtgttgctgacagggatatcaccgtgtcaaggaccccagtgcct 232
Query: 236 caggcctgtgggaatgtttggggtgaggatg 266
|||||||||||||||| ||||||| ||||||
Sbjct: 231 caggcctgtgggaatggttggggtaaggatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 266
Length of database: 671
Length adjustment: 9
Effective length of query: 257
Effective length of database: 662
Effective search space: 170134
Effective search space used: 170134
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
