XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCTTACTTTTTTTTATAATAGTGCATTTTACCAAATAGAAAATTTTAATA
AGTTTAATTTATGATTATTTATTTCCATGGATGGTGTTTTATGATCTTTG
CAATATTTGCCTGTCCTATGTGTTCTGGAATAATAATTGCCTTTTATGTC
TTCCAAGATATTTCATGTCTCTAACATTTATATTTACATGTACATTGCAT
CTTGCATCAATTGCATGAATATTTTATATCCCTTAGTTTTAAATTTCATC
AAAGCTTTTTAATTTTTATTGTTGAAGATTTTGTTTTGTCAACTTTATTC
CCCATAATTTGGTGATCTCTTATATTATGAATATTGATATGTTTGGTAAT
ATGCTTTACCGTGTAAGAGTACTTTAGAAAGTAGAGGGTACAAACAGTTC
ACACATATCCTTTCTCTCCCTCCCATATTAATTTCCTTTGCTCAATGAAC
TAATATTGGAATTTAATTATTAACTAAAGGCGATAATTTCCATTAAGGTG
CATTCTCTGTATTAGACAATTTTATGGATTTAACAAATGCATGAGGCCAC
ATATATACTACCTCAGTGCCATGCAAAACAGTTTCATTGACTTATAAATC
TGCACACCAACATTTTATTTTCTTTTCTCATACCTCCAACAACCAATGAA
ATGGCCCTCTGAATTTTTCTTCCTCCCCATGTGCCATAAAAAGAAACTCC
TTGAACCTAGTTTTTTAAA

GCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAGTTAGCCAGAATTTTATTGAGTATTTTT
GCATTGATATTCATAAGGGAAATTGGTCTGAAGTTCTCTATCTTTGTTGG
ATCTTTCTGTGGTTTAGGTATCAGAGTAATTGTGGCTTCATAGAATGAAT
TGGGTAGACTACTTTCTGCTTTTATTTTGTGGAATAGTTTGTGTAGAACT
GGAACTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAATCCATC
TGGTCCTGGGATTTTTTTTTTTGGTTGGTAGACTATTAATATTAATGACT
GCTTCTATTTCTTTATGGGATATAGGGCTGTTTAGATCATTAACCTGATC
CTGATTTAACTTTGGTACCTGGTATCTGTCTAGAAATTTGTCCATTTCAT
CCAGGTTTTCCAGTTTTGTTGAGTATACCCTTTTGTAGAAGGATCTGATG
GGGTTTTGGATTTCTTCNGGCTCTGTTGGTATGTCCCCCCTTTTCATTTC
TGAATGGGGTTACTAAGGAAGCTGTGCCTGGGGCCCTCTAGTGATGCTGG
GTTTAAGGGTTTTCTCTCCTTGCGGGTTTTTCCCCCAAAACCCCCTCCTC
CCCTGGGGGAATCTTTTGTAACTTCCTCCCGCCCCCCACCTTTTGGTTTC
CCCCTGTCAGAGTTGCCTTGTCGTGCCCCTTTATTCTTTTTTCCTATCTG
TGTTTTGTTCTCCCTGTTTTGCCTTCGCATTN

Query= MSMg01no357_a22.b1 MSMg01no357_a22.b1 CHROMAT_FILE:
MSMg01no357_a22.b1 PHD_FILE: MSMg01no357_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:57 2005
         (499 letters)



>mm_chr15_60293070_60293968
          Length = 899

 Score =  936 bits (484), Expect = 0.0
 Identities = 493/496 (99%), Gaps = 1/496 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttac-ttttttttataatagtgcattttaccaaatagaaaattttaataagtt 63
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gaattccttactttttttttataatagtgcattttaccaaatagaaaattttaataagtt 720

                                                                       
Query: 64  taatttatgattatttatttccatggatggtgttttatgatctttgcaatatttgcctgt 123
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tcatttatgattatttatttccatggatggtgttttatgatctttgcaatatttgcctgt 660

                                                                       
Query: 124 cctatgtgttctggaataataattgccttttatgtcttccaagatatttcatgtctctaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cctatgtgttctggaataataattgccttttatgtcttccaagatatttcatgtctctaa 600

                                                                       
Query: 184 catttatatttacatgtacattgcatcttgcatcaattgcatgaatattttatatccctt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 catttatatttacatgtacattgcatcttgcatcaattgcatgaatattttatatccctt 540

                                                                       
Query: 244 agttttaaatttcatcaaagctttttaatttttattgttgaagattttgttttgtcaact 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 agttttaaatttcatcaaagctttttaatttttattgttgaagattttgttttgtcaact 480

                                                                       
Query: 304 ttattccccataatttggtgatctcttatattatgaatattgatatgtttggtaatatgc 363
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 479 ttattccccataatttggtgatctcttatattatgaatattgatatgttttgtaatatgc 420

                                                                       
Query: 364 tttaccgtgtaagagtactttagaaagtagagggtacaaacagttcacacatatcctttc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tttaccgtgtaagagtactttagaaagtagagggtacaaacagttcacacatatcctttc 360

                                                                       
Query: 424 tctccctcccatattaatttcctttgctcaatgaactaatattggaatttaattattaac 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tctccctcccatattaatttcctttgctcaatgaactaatattggaatttaattattaac 300

                           
Query: 484 taaaggcgataatttc 499
           ||||||||||||||||
Sbjct: 299 taaaggcgataatttc 284


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space:   434721
Effective search space used:   434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)