XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGGAC
CTGCTCCCCAGAAGAACCCGTACTGGTACTGTGAACCTTATCAAGAACTA
TGCCTAGGGTGGTCATAATGCTCAAGGGAGGGATTTATTACTTTACTAAA
CTGACTTACGTAAACATTCTTCTAAATATCCGTTTATATAATGTAGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNTTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNTNNTTTTTTTTTTTT
TTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTNTTT
TTTTTTTNTTNNTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTNTTTTTTT
TTTTTTTTTNNNNTTTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTTTTTN
NTTTTTTTTTNTTTTTTTTTTTTTTTTNNTTTTTNTTTTTTTTTTTTTTT
TTNTTTTTTNTTTTNTTTTTTTTTTTTTTTTTTTTTTNNNTTTTTTTTTT
N

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCCTCAGAAGACTCAATAGGCAATATTTNTGGAGGT
ATTTCAGAGGCAAACAAACAAAACAACAACAAAACCAAACTATAATAGTC
TGTACACCAGGCTGGCCTCGAGCTCTCAGAAATCTGCCTGCCTCTGTCTC
CAAGCACTGGGATTAAATGTGTGTGCTATCATGCCAGGCTTCCTCTACAT
TTTTTAATCTTTGTTCTCACCTTTTACCTGACTTCTTGACCCTAATGTTG
GGGAGCTAAGGATGAGGGTCAGGAATAGAGTACCCTACTTCTCTCCCATC
TTGGGCTCCAGGTCTACATCTATCCCAGAGCATGATAGTCTCAGGATTTT
CAGTGTACAGTTATAAAAGGTCACGCGTGCTGACTTCTTTTGACTTGGGC
ACTACACTCCAAACACAGATATGTCCCTGCTCTCTGCCTTACAACTGGAA
GTCTGTCTGGACGAGAGATTCTCCCAGCCCCCTTCTCCTTTGTTTACCCC
TCTCATTTCCATCTCTCTTTCTCTAAGGCCTGAAATAATCATGCACGGTT
CTCCACCTCTTGGGGTTACAGTGAGTTACTGTGTAAAGTCTTCCCAATAT
CATCTGGGACCTTAAAAATGGGGCCAGGGGGGACTTATAAACTTATAGGC
TTAATTCAACATGAAG

Query= MSMg01no358_f14.g1 MSMg01no358_f14.g1 CHROMAT_FILE:
MSMg01no358_f14.g1 PHD_FILE: MSMg01no358_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:35 2005
         (516 letters)



>mm_chr15_51609473_51610388
          Length = 916

 Score =  882 bits (456), Expect = 0.0
 Identities = 503/520 (96%), Gaps = 6/520 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctcagaagactcaataggcaatatttntggaggtatttcagaggcaaacaaacaa---a 57
           ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||   |
Sbjct: 199 cctcagaagactcaataggcaatattt-tggaggcatttcagaggcaaacaaacaaaaca 257

                                                                       
Query: 58  acaacaacaaaaccaaactataatagtctgtacaccaggctggcctcgagctctcagaaa 117
           |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 acaacaacaaaatcaaaccataatagtctgtacaccaggctggcctcgagctctcagaaa 317

                                                                       
Query: 118 tctgcctgcctctgtctccaagcactgggattaaatgtgtgtgctatcatgccaggcttc 177
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 318 tctgcctgcctctgtctccaagcactgggattaaatgtgtgcgctatcatgccaggcttc 377

                                                                       
Query: 178 ctctacattttttaatctttgttctcaccttttacctgacttcttgaccctaatgttggg 237
           ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 378 ctctacattttttaatctttggtctcaccttttacctgacttcttgatcctaatgttggg 437

                                                                       
Query: 238 gagctaaggatgagggtcaggaa-tagagtaccctacttctctcccatcttgggctccag 296
           ||| |||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 438 gaggtaaggatgagggtc-ggaaatagagtaccctacttctctcccaccttgggctccag 496

                                                                       
Query: 297 gtctacatctatcccagagcatgatagtctcaggattttcagtgtacagttataaaaggt 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 497 gtctacatctatcccagagcatgatagtctcaggattttcagtgtacagttataaaatgt 556

                                                                       
Query: 357 cacgcgtgctgacttcttttgacttgggcactacactccaaacacagatatgtccctgct 416
           ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 557 cacgcgtgctgacctcttttgacttgggcgctacactccaaacacagatatgtccctgct 616

                                                                       
Query: 417 ctctgccttacaactggaagtctgtctggacgagagattctcccagcccccttctccttt 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ctctgccttacaactggaagtctgtctggacgagagattctcccagcccccttctccttt 676

                                                   
Query: 477 gtttacccctctcatttccatctctctttctctaaggcct 516
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gtttacccctctcatttccatctctctttctctaaggcct 716


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space:   458436
Effective search space used:   458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)