Query= MSMg01no361_h03.b1 MSMg01no361_h03.b1 CHROMAT_FILE:
MSMg01no361_h03.b1 PHD_FILE: MSMg01no361_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:30 2005
(675 letters)
>mm_chr15_20237038_20238113
Length = 1076
Score = 1276 bits (660), Expect = 0.0
Identities = 669/672 (99%), Gaps = 1/672 (0%)
Strand = Plus / Minus
Query: 5 gaattctttctatcttataggatgtgattaaggtcatgttcaactaccccttaatttctt 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 gaattctttctaacttataggatgtgattaaggtcatgttcaactaccccttaatttctt 817
Query: 65 tttgttgattgagacactccatatcattgtacagagatccaaacctgctcctcttggaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 tttgttgattgagacactccatatcattgtacagagatccaaacctgctcctcttggaga 757
Query: 125 actgctgtcaaagtgtatgaagaatgtaggaggatagcaacttggaaataacatgtgttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 actgctgtcaaagtgtatgaagaatgtaggaggatagcaacttggaaataacatgtgttg 697
Query: 185 gaaattacaaaagtttactgagattctatcaacaacaaaatgagcttggaaaatgaaaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gaaattacaaaagtttactgagattctatcaacaacaaaatgagcttggaaaatgaaaga 637
Query: 245 agtttcttgaagcaatatagctggacctaacaactcaccttgttgggattatattgagca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 agtttcttgaagcaatatagctggacctaacaactcaccttgttgggattatattgagca 577
Query: 305 gagaagggagaaagtattgttgagatttttatctcactgaaatagtgaacgtttgaatct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gagaagggagaaagtattgttgagatttttatctcactgaaatagtgaacgtttgaatct 517
Query: 365 tcttcaggctgatgcttttgtgaaatttatcatacagaaaatgaaaacttaacattctca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tcttcaggctgatgcttttgtgaaatttatcatacagaaaatgaaaacttaacattctca 457
Query: 425 taattctctcatggatttctgacttcttgacgaatatctaattgtttgatactgcagagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 taattctctcatggatttctgacttcttgacgaatatctaattgtttgatactgcagagt 397
Query: 485 taagattatagccaaattttagttttagttcattcatttttttgctccattacgcttgga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 taagattatagccaaattttagttttagttcattcatttttttgctccattacgcttgga 337
Query: 545 aatttaatatggtgtatgatattatgggcatttctagtccaggttacgcaagcat-aaaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 336 aatttaatatggtgtatgatattatgggcatttctagtccaggttacgcaagcataaaaa 277
Query: 604 aacccaccaaaatagttcttttgggataataatgactgatgaatttaaacaatgcacact 663
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 276 aacccaccaaaatagttcttttgggataataatgaccgatgaatttaaacaatgcacact 217
Query: 664 gataaagtttac 675
||||||||||||
Sbjct: 216 gataaagtttac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1076
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1066
Effective search space: 708890
Effective search space used: 708890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_h03.g1 MSMg01no361_h03.g1 CHROMAT_FILE:
MSMg01no361_h03.g1 PHD_FILE: MSMg01no361_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:30 2005
(511 letters)
>mm_chr15_20049706_20050613
Length = 908
Score = 859 bits (444), Expect = 0.0
Identities = 463/470 (98%), Gaps = 3/470 (0%)
Strand = Plus / Plus
Query: 1 actgagatcactagaaggttaggtttaatcaccccagaaccaagttcctggacaaaacct 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgagatcactacaaggttaggtttaatcaccccagaaccaagttcctggacaaaacct 260
Query: 61 tgtgcttacactatttcctgcaagcagtgaatgagtttccttgaccctgtactttcaaaa 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgctttcactatttcctgcaagcagtgaatgagtttccttgaccctgtactttcaaaa 320
Query: 121 ggtagtattgtgttaatgaagtgtgtccattggcatctatgctttctataactcggttga 180
||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtggtattgtgttaatgaagtgt--ccattggcatctatgctttctataactcggttga 378
Query: 181 tactaagtctcctagacagaagggctttcagagtttcaaatgtgtatcaagatcaatacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tactaagtctcctagacagaagggctttcagagtttcaaatgtgtatcaagatcaatacc 438
Query: 241 actgtcactagtgctgttggcacaaacagctagggcaagtaacccaaattatgtttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 actgtcactagtgctgttggcacaaacagctagggcaagtaacccaaattatgtttgaaa 498
Query: 301 tgcttgagagtcccaaatttaagcactgacttggaaatcaaaccctgcctagcttaaggt 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 499 tgcttgagagtcccaaatttaagcactgacttggaagtcaaaccctgcctagcttaaggt 558
Query: 361 tagctgatgggtgatggagatagcattttgacctactgaagcttagttgggtacactctt 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tagctgatgg-tgatggagatagcattttgacctactgaagcttagttgggtacactctt 617
Query: 421 acagaaatgtacctagccttaggtaggagattagtgtctgatgtagtctt 470
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 acagaaatgtacctagccttaggtaggagattagtgtctgatgtagtctt 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 908
Length adjustment: 10
Effective length of query: 501
Effective length of database: 898
Effective search space: 449898
Effective search space used: 449898
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
