Query= MSMg01no362_l14.b1 MSMg01no362_l14.b1 CHROMAT_FILE:
MSMg01no362_l14.b1 PHD_FILE: MSMg01no362_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:12 2005
(476 letters)
>mm_chr15_95348506_95349377
Length = 872
Score = 864 bits (447), Expect = 0.0
Identities = 466/475 (98%), Gaps = 7/475 (1%)
Strand = Plus / Plus
Query: 5 gaattcaattatccacgaattctcagttccaaaatagatgctactactcctgctgtgcca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaattatccacgaattctcagttccaaaatagatgctactactcctgctgtgcca 264
Query: 65 aatcacagtaggcatagaggcaaaagcagacaaatgttctattcacctcacagtgcaggc 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 265 aatcacagtaggcatagaggcaaaagcagacaaatgttctattcacctcacagt----gc 320
Query: 125 ttcagaaggtcaaactgggactcaggaagggaagccaagggtatcagtggcatgtgttcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 ttcagaaggtcaaactgggactcaggaagggaagccaagggtatcagtggcgtgtgttcc 380
Query: 185 ttccttttgacagcttac--agactgtcctcattccttggctaatgtctgcttctaccct 242
|||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 ttccttttgacagcttacagagactgtcctcattccttggctcatgtctgcttctaccct 440
Query: 243 caaagacagcaagcaccatcaagttctaggttgtgtcactttcacagtgactcaaatgtc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaagacagcaagcaccatcaagttctaggttgtgtcactttcacagtgactcaaatgtc 500
Query: 303 tccccctaccaggacaaagttttgattgcccagacaggccagacgatgttaatgtaagaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccccctaccaggacaaagttttgattgcccagacaggccagacgatgttaatgtaagaa 560
Query: 363 taaccctcttattttaaagctagctgactacctaaataaccttaattgcatct-cagact 421
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 taaccctcttattttaaagctagctgactacctaaataaccttaattgcatctgcagact 620
Query: 422 taagggatcgctgctgtataacagtgatcacgggtgatgagagttagtacgtaga 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taagggatcgctgctgtataacagtgatcacgggtgatgagagttagtacgtaga 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 872
Length adjustment: 10
Effective length of query: 466
Effective length of database: 862
Effective search space: 401692
Effective search space used: 401692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_l14.g1 MSMg01no362_l14.g1 CHROMAT_FILE:
MSMg01no362_l14.g1 PHD_FILE: MSMg01no362_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:12 2005
(202 letters)
>mm_chr15_95530809_95531410
Length = 602
Score = 348 bits (180), Expect = e-100
Identities = 194/200 (97%), Gaps = 4/200 (2%)
Strand = Plus / Minus
Query: 1 actgaatggaagtggggtggagaagtggggagcacccaaggaggtggaagaaggggagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 actgaatggaagtggggtggagaagtggggagcacccaaggaggtggaagaaggggagca 339
Query: 61 ttgggctctgaagaccttctgcagtaattgtttgattgaagcacttggggcagcaggcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttgggctctgaagaccttctgcagtaattgtttgattgaagcacttggggcagcaggcac 279
Query: 121 aacattatagaaagacatgca--tgtctgaaggttcacagtgtgcatctggagtagctcc 178
||||||||||||||||| || | ||||||||||||||||||| |||||||||||||||
Sbjct: 278 aacattatagaaagaca--cacgtatctgaaggttcacagtgtgtatctggagtagctcc 221
Query: 179 cgtggcgggggtgggggtgg 198
||||||||||||||||||||
Sbjct: 220 cgtggcgggggtgggggtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 602
Length adjustment: 8
Effective length of query: 194
Effective length of database: 594
Effective search space: 115236
Effective search space used: 115236
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
