Query= MSMg01no364_m18.b1 MSMg01no364_m18.b1 CHROMAT_FILE:
MSMg01no364_m18.b1 PHD_FILE: MSMg01no364_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:03 2005
(408 letters)
>mm_chr15_28991465_28992272
Length = 808
Score = 745 bits (385), Expect = 0.0
Identities = 400/405 (98%)
Strand = Plus / Plus
Query: 4 ggaattcatcaaactttatcgcactcattaaactcattcatttgattggagaattgctct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatcaaactttatcgcactcattaaactcattcatttgattggagaattgctct 263
Query: 64 agaataaaagatcaataatcactgctataagattgtcatccaggtcatctcagttggcac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agaataaaagatcaataatcactgctataagattgtcatccaggtcatctcagttggcac 323
Query: 124 agaaggaaccacctatgcattatctgtatctctctaggtatattaatgtcaagaaatcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agaaggaaccacctatgcattatctgtatctctctaggtatattaatgtcaagaaatcca 383
Query: 184 aattagttgtttacatactccatgtatgccataaagcactcacaagtattcattttgaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 384 aattagttgtttacatactccatgtatgccataaagcactcacaagtattcatttcgaag 443
Query: 244 actgacttttctccactctgtgcagtatgctcacagatgtagaatgtggaaatttgccag 303
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 444 actgacttttctccactctgtgcagtatgctcacagagggagaatgtggaaatttgccag 503
Query: 304 ctgctcatgtatagttgtgtcagtattgttaaattatagttccattaaagtatcaaccac 363
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 504 ctgctcatgtatagttgtgtcagtattgtcaaattatagttccattaaagtatcaaccac 563
Query: 364 atcgttaactgagactcttgcctttaatcttaagtctatacccat 408
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 564 atcgttaactgagtctcttgcctttaatcttaagtctatacccat 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_m18.g1 MSMg01no364_m18.g1 CHROMAT_FILE:
MSMg01no364_m18.g1 PHD_FILE: MSMg01no364_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:03 2005
(406 letters)
>mm_chr15_29164587_29165392
Length = 806
Score = 716 bits (370), Expect = 0.0
Identities = 397/406 (97%), Gaps = 1/406 (0%)
Strand = Plus / Minus
Query: 1 tataaactataaaggatgagaaggtatttcacagaaatgtttgaaaactccaagaaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tataaactataaaggatgagaaggtatttcacagaaatgtttgaaaactccaagaaaaga 488
Query: 61 atggaggaagggcagaatttccacagtgtcagctgataaaataaagaggagaaaatggat 120
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 487 atggaggaagggcagaatttccacagtgtcagatggtaaaataaagaggagaaaatggat 428
Query: 121 taaaatagtactgcatcatactgagaatcacatgagatgacacaatggtggtggacttgt 180
||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 427 taaaatagtgctgcatcatattgagaatcacatgagatgacacaatggtgctggacttgt 368
Query: 181 gttcttgacccaggaatgggttcattttaaagatatggttggaatatagtcaacatgctc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cttcttgacccaggaatgggttcattttaaagatatggttggaatatagtcaacatgctc 308
Query: 241 atcaataactttaatttgggtgatttttagaggattgttgtatgctctgtgtttgtgtaa 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 307 atcaataactttaatttgggtgatttgtagaggattgttgtatgctctgtgtttgtgtaa 248
Query: 301 tgtcagtgaactaatgaaaataatgaacagcaaaataagagggtatgaattttaaatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgtcagtgaactaatgaaaataatgaacagcaaaataagagggtatgaattttaaatttt 188
Query: 361 atatattaatattaatatgtaaaaatatgtattggagatatagaat 406
|||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 187 atatattaatattaatatgt-aaaatatgtattggagacatagaat 143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
