Query= MSMg01no366_h15.b1 MSMg01no366_h15.b1 CHROMAT_FILE:
MSMg01no366_h15.b1 PHD_FILE: MSMg01no366_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:20 2005
(493 letters)
>mm_chr15_41698043_41698935
Length = 893
Score = 907 bits (469), Expect = 0.0
Identities = 487/493 (98%)
Strand = Plus / Plus
Query: 1 ttgtctgtttgtttttatgaaagcctgtttacactagggtcaatgatgaacacacatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtctgtttgtttttatgaaagcctgtttacactagggtcaatgatgaacacacatttt 260
Query: 61 ttaaagtaatgggttgcacaggtagaagaccaaaaacatttattgaacactatttggctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaagtaatgggttgcacaggtagaagaccaaaaacatttattgaacactatttggctg 320
Query: 121 gcatttttctaaatacttattattctccgcaatctttaaaaatggatatttcagctgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatttttctaaatacttattattctccgcaatctttaaaaatggatatttcagctgtgt 380
Query: 181 agatgaagaaactgaagccaggaagacacaggagcaccctaaagacacagaactgtaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatgaagaaactgaagccaggaagacacaggagcaccctaaagacacagaactgtaagc 440
Query: 241 agtaggctaatattggactttgaagccaagttaagccgtcaggatgtaactttaaaaaaa 300
|||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 agtaggctaagactggactttgaagccaagttaagccgtcaggatgtaacttaaaaaaaa 500
Query: 301 aatactgcttcctctaaaacagagggaggagtccatcttcacaaagcacccaactttatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatactgcttcctctaaaacagagggaggagtccatcttcacaaagcacccaactttatc 560
Query: 361 tccagagcattaagtagcctcacatctggaagctttggacttgaaggtgtaacgagccgt 420
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 tccagagcgttaagtagcctcacatctggaagctttggacttgaaggtgtaacgagccat 620
Query: 421 tcctgcactgtccccatgggtggcatggcagggccctatgagcactcataagtcactgtt 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tccagcactgtccccatgggtggcatggcagggccctatgagcactcataagtcactgtt 680
Query: 481 ctaagcccgagag 493
|||||||||||||
Sbjct: 681 ctaagcccgagag 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_h15.g1 MSMg01no366_h15.g1 CHROMAT_FILE:
MSMg01no366_h15.g1 PHD_FILE: MSMg01no366_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:20 2005
(532 letters)
>mm_chr15_41886323_41887255
Length = 933
Score = 1007 bits (521), Expect = 0.0
Identities = 530/533 (99%), Gaps = 1/533 (0%)
Strand = Plus / Minus
Query: 1 attcttcttggggctcgttagcagaaatcattccagcttgcttcctcctgtagttatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 attcttcttggggctcgttagcagaaatcattccagcttgcttcctcctgtagttatgga 674
Query: 61 aagaaaaactgcatctcgactctgacacattaatcaaatatattatagaattagtatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aagaaaaactgcatctcgactctgacacattaatcaaatatattatagaattagtatgct 614
Query: 121 tctacatgcgagatttctctctcaagccacccttggagaactcccctgatcttttatatt 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tcttcatgcgagatttctctctcaagccacccttggagaactcccctgatcttttatatt 554
Query: 181 tatgatcacatttatttggccttgaaatgc-aaaaaaaatcctaaatcatcaaaaattta 239
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 553 tatgatcacatttatttggccttgaaatgcaaaaaaaaatcctaaatcatcaaaaattta 494
Query: 240 catactattttgtcttttggttaataagtttccaaataaaagtaacttcataccttagca 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 catactaatttgtcttttggttaataagtttccaaataaaagtaacttcataccttagca 434
Query: 300 atgtgtacagtaattacctggtatcagtcaaacaacaggaaatccttttatttaaagcta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atgtgtacagtaattacctggtatcagtcaaacaacaggaaatccttttatttaaagcta 374
Query: 360 catttaaacaaaaattttgttagtctaataaggactaataaaaataacaaaaagactaat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 catttaaacaaaaattttgttagtctaataaggactaataaaaataacaaaaagactaat 314
Query: 420 aaactggtattaaaaggaagaactataaaataacaataaggacatctgaaaaagttatgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaactggtattaaaaggaagaactataaaataacaataaggacatctgaaaaagttatgg 254
Query: 480 gaaattatactattaagtagttatgtaataaaactataataagcataagtctg 532
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gaaattatactattaagtagttatgtaataaaactataataagcataagtctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 933
Length adjustment: 10
Effective length of query: 522
Effective length of database: 923
Effective search space: 481806
Effective search space used: 481806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
