NNNNTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAACCATATTTGCGTTCCTGACATGAAATTGGTACCAAGTAG
ATATTGCATGAATGACAAAAAGAACTCCCGAAGATCTGAGAGTGTGCTTC
TGTAGCATTCACCATGGTAATTATCACCTCTCTGCCAGCATATGGAGTAT
AAAAACAGGGTGGTTTGTAGTTACATTTTGCTGCCGATGTACATGTAGTG
TGTATTTAATGCATGAAATAGAAGTCTAGTTTGCTGAATTTCTTTCTGAT
CACATTTAGTAAAGATAAAGATAAAGTTTTCTCTTTGATGTTTGAAGGGT
CCTGGGAACTGGAAATTTCCAAACCCATGGAGGAGTCGAAATTTGCCCCA
AGTTGTTTTTGTACTTTCTCCATGGAGCTTATGGCATAAATGCCTCCGAA
CCACATATAACTTTAGACAGACTCAGATGATGGTTATCAAAACCCTCTCT
GGGAGATCTCACTGCTCTTTCAGGCAAGACAACATACAGTTGGAAATGAC
TAGAACCATGCCACACTCAGGCAAATGTTACATTTTACCAATTTCATAAT
GACTGTGACAAGATAATATTATGCCTTTCAAGTGCAAACTCTTGTCTAAN
ATAACTTCATTGTTATANATACAACTTTACTTTTTGTAGACCATTCCATT
CTCCTTTGCACAATCCCTTGCAAATCTGGTGACTTAAGGTCATAAAATN

NNCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTT
TTTAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTAA
GTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACA
AGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTGAAGTATTAG
CCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAA
GAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAG
TGACCCTAAAAATTCTACCAGAGAACTCCTAAACCTGATAAACAGCTTCG
GTGAAGTAGCTGGATATAAAATAAACTCAAACAAGTCAATGGCCTTTCTC
TATACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTT
CTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACTCTAACTAAGG
AAGTGAAAGATCTGTATGATAAAAACTTCAAATCTCTGAAGAAAGAAATT
AAGGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAG
GATCAACATTGTTAAAATGGGTATCTTGCCAAAAGCAATCTACAGATTCA
ATGGNATCCCCATCAAAATCCAACTCAATTCTTCAATGAATTGGAAGGGA

Query= MSMg01no366_i03.b1 MSMg01no366_i03.b1 CHROMAT_FILE:
MSMg01no366_i03.b1 PHD_FILE: MSMg01no366_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:22 2005
         (555 letters)



>mm_chr15_49292454_49293409
          Length = 956

 Score = 1031 bits (533), Expect = 0.0
 Identities = 548/553 (99%), Gaps = 1/553 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcaaccatatttgcgttcctgacatgaaattggtaccaagtagatattgcatgaa 63
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ggaattcaaccatatttgtgttcctgacatgaaattggtaccaagtagatattgcatgaa 697

                                                                       
Query: 64  tgacaaaaagaactcccgaagatctgagagtgtgcttctgtagcattcaccatggtaatt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tgacaaaaagaactcccgaagatctgagagtgtgcttctgtagcattcaccatggtaatt 637

                                                                       
Query: 124 atcacctctctgccagcatatggagtataaaaacagggtggtttgtagttacattttgct 183
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 636 atcacctctctgccagcatatggactataaaaacagggtggtttgtagttacattttgct 577

                                                                       
Query: 184 gccgatgtacatgtagtgtgtatttaatgcatgaaatagaagtctagtttgctgaatttc 243
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gccaatgtacatgtagtgtgtatttaatgcatgaaatagaagtctagtttgctgaatttc 517

                                                                       
Query: 244 tttctgatcacatttagtaaagat-aaagataaagttttctctttgatgtttgaagggtc 302
           |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 516 tttctgatcacatttagtaacgataaaagataaagttttctctttgatgtttgaagggtc 457

                                                                       
Query: 303 ctgggaactggaaatttccaaacccatggaggagtcgaaatttgccccaagttgtttttg 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ctgggaactggaaatttccaaacccatggaggagtcgaaatttgccccaagttgtttttg 397

                                                                       
Query: 363 tactttctccatggagcttatggcataaatgcctccgaaccacatataactttagacaga 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tactttctccatggagcttatggcataaatgcctccgaaccacatataactttagacaga 337

                                                                       
Query: 423 ctcagatgatggttatcaaaaccctctctgggagatctcactgctctttcaggcaagaca 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ctcagatgatggttatcaaaaccctctctgggagatctcactgctctttcaggcaagaca 277

                                                                       
Query: 483 acatacagttggaaatgactagaaccatgccacactcaggcaaatgttacattttaccaa 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 acatacagttggaaatgactagaaccatgccacactcaggcaaatgttacattttaccaa 217

                        
Query: 543 tttcataatgact 555
           |||||||||||||
Sbjct: 216 tttcataatgact 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 956
Length adjustment: 10
Effective length of query: 545
Effective length of database: 946
Effective search space:   515570
Effective search space used:   515570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)