Query= MSMg01no366_l19.b1 MSMg01no366_l19.b1 CHROMAT_FILE:
MSMg01no366_l19.b1 PHD_FILE: MSMg01no366_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:40 2005
(482 letters)
>mm_chr15_36691569_36692450
Length = 882
Score = 864 bits (447), Expect = 0.0
Identities = 471/479 (98%)
Strand = Plus / Plus
Query: 4 gaattcacagagccttcccactccatacttaagggcagcaggcaccaagcaggtctttcc 63
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcacagagccatctgactccatacttaagggcagcaggcaccaagcaggtctttcc 263
Query: 64 cttcccctgacacagaatcttcctagcttagagtctttccagaactggtcccagagtgat 123
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 264 cttcccctgacacggaatcttcctagcttagagtctttccggaactggtcccagagtgat 323
Query: 124 caaggatggtgcaagtgtcagctcgatcccaatttacccattctaacagctaagcagact 183
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caaggatggtgcgagtgtcagctcgatcccaatttacccattctaacagctaagcagact 383
Query: 184 ccttcctaatattaaaatgttaaaaacagggctataaaatcagctggttttgtcattttg 243
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccttcctaatattaaaatgataaaaacagggctataaaatcagctggttttgtcattttg 443
Query: 244 gtgtctccgagtgggacgagccgggggtgtgagctggttgtgggcagtgacacacactgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgtctccgagtgggacgagccgggggtgtgagctggttgtgggcagtgacacacactgc 503
Query: 304 tggcagcaagaggatgaatcattaaaacagagtgtggagactcatcatggcgagagctag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tggcagcaagaggatgaatcattaaaacagagtgtggagactcatcatggcgagagctag 563
Query: 364 cctggcctggggtggggcaagtaccccaggcaagagtcagggcctagagcttttcttccc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctggcctggggtggggcaagtaccccaggcaagagtcagggcctagagcttttcttccc 623
Query: 424 agctctgccttggctgggggcagctccagacctcagctttctttgatctagacttgggt 482
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agctctgctttggctgggggcagctccagacctcagctttctttgatctagacttgggt 682
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_l19.g1 MSMg01no366_l19.g1 CHROMAT_FILE:
MSMg01no366_l19.g1 PHD_FILE: MSMg01no366_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:40 2005
(445 letters)
>mm_chr15_36891291_36892135
Length = 845
Score = 729 bits (377), Expect = 0.0
Identities = 422/443 (95%), Gaps = 10/443 (2%)
Strand = Plus / Minus
Query: 3 tcccaggtggttcctgtcagaccttctgtgtttgtattcctctgttttgtgtaagaatcc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 tcccaggtggttcctgtcagaccttctgtgtttgtattcctctgttttgtgtaagaatcc 786
Query: 63 agtaacctctttgtaccttgctggtgtatcacccaacttccttattttcttctgtataaa 122
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 785 agtaacctctttgtaccttgctggtgtatcacccaacttccctattttcttctgtataaa 726
Query: 123 aagtttgatgctcgatttgacaaattacattcagattctacacaacctcttctgtgtgca 182
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 725 aagtttgatgctcgatttgacaaattacattcagattctacacaacctctcctgtgtgca 666
Query: 183 tctgtctgtcgtttcatccgacgctttgcccacctgcgactagagacccattccatgcag 242
|| |||||| |||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 665 tcagtctgt----------gacgctttgcccacctgcgactagagacccgttccacgcag 616
Query: 243 acaaatgtttccagagggtctgcggcagaatgggaaggacccagctttagaaacaggcag 302
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 acaaaggggcccagagggtctgcggcagaatgggaaggacccagctttagaaacaggcag 556
Query: 303 gtaagcagggtggctgcagacagtgaaaggctctcctctgcctgaggtttactttcttta 362
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gtaaacagggtggttgcagacagtgaaaggctctcctctgcctgaggtttactttcttta 496
Query: 363 aaggacaaaaacaaagcatctgtttagtgtatgtgtgtctattgtgtgtgtgtctgtgtg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aaggacaaaaacaaagcatctgtttagtgtatgtgtgtctattgtgtgtgtgtctgtgtg 436
Query: 423 tgtgtcgtttgtatgtatgtgtc 445
|||||||||||||||||||||||
Sbjct: 435 tgtgtcgtttgtatgtatgtgtc 413
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
