Query= MSMg01no366_n05.b1 MSMg01no366_n05.b1 CHROMAT_FILE:
MSMg01no366_n05.b1 PHD_FILE: MSMg01no366_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:46 2005
(174 letters)
>mm_chr15_75911743_75912316
Length = 574
Score = 337 bits (174), Expect = 3e-97
Identities = 174/174 (100%)
Strand = Plus / Minus
Query: 1 cagcctgctaaggccctcccctggctccccagcattccacttctctgcccacttaggttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cagcctgctaaggccctcccctggctccccagcattccacttctctgcccacttaggttt 315
Query: 61 gctttcagtagagctttttcctgtttaaagggggtaccgagggggaggaaaatattctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gctttcagtagagctttttcctgtttaaagggggtaccgagggggaggaaaatattctgc 255
Query: 121 catgttttgctaaagatctctatattaaagtctgaaaacccgaggggtggaaaa 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 catgttttgctaaagatctctatattaaagtctgaaaacccgaggggtggaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no366_n05.g1 MSMg01no366_n05.g1 CHROMAT_FILE:
MSMg01no366_n05.g1 PHD_FILE: MSMg01no366_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:46 2005
(444 letters)
>mm_chr15_75751505_75752345
Length = 841
Score = 789 bits (408), Expect = 0.0
Identities = 435/444 (97%), Gaps = 3/444 (0%)
Strand = Plus / Plus
Query: 1 accctactggcccttggggtaccacgtgcgcccctcccgccaaggcttacgaactcctcc 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accctactggcccttggtgtaccacgtgcgcccctcccgccaaggcttacgaactcctcc 260
Query: 61 cattagaacgaaagctcccccagccaggcctcgcctccccacctgctcggatgaggcctc 120
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 261 cattagaacgaaagctcccccagccaggcctcgcct-cccacctgcttggatgaggcctc 319
Query: 121 gggcaatggcctccgccatgcggcctgcacccacgaagcccacacgccgaggttcagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gggcaatggcctccgccatgcggcctgcacccacgaagcccacacgccgaggttcagaca 379
Query: 181 ttgtcgccgccatcctgctctgagctggccttctctcgtccttgcggcagcgggtcccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgtcgccgccatcctgctctgagctggccttctctcgtccttgcggcagcgggtcccgc 439
Query: 241 ccactattaactgctttgaccgacagaagcgactgggcgggtttggggaggacggagggg 300
|||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 440 ccacta-gaactgctttgaccgacagaagcgactgggcgggttt-gggaggacagagggg 497
Query: 301 cggggcggggcggggcggggcgggcgcagacacttggattttgacgcttgaggcgggatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cggggcggggcggggcggggcgggcgcagacacttggattttgacgcttgaggcgggatt 557
Query: 361 ttccccaagctttgttaaaccattggtcagtgattttgctgaggggaaagaagagaaagg 420
| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tcccccaagctttggtaaaccattggtcagtgattttgctgaggggaaagaagagaaagg 617
Query: 421 aaggggagctagtcctaagcaggc 444
||||||||||||||||||||||||
Sbjct: 618 aaggggagctagtcctaagcaggc 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 841
Length adjustment: 10
Effective length of query: 434
Effective length of database: 831
Effective search space: 360654
Effective search space used: 360654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
