Query= MSMg01no367_i08.b1 MSMg01no367_i08.b1 CHROMAT_FILE:
MSMg01no367_i08.b1 PHD_FILE: MSMg01no367_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:42 2005
(249 letters)
>mm_chr15_59571547_59572195
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Minus
Query: 1 acaggaaattgggatacaggaaaggcagaattcttaatgggactgctttccctttataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acaggaaattgggatacaggaaaggcagaattcttaatgggactgctttccctttataaa 390
Query: 61 gatttgtatctttgtataacttaggaaacgcacactgccggtgtgatactatctcagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gatttgtatctttgtataacttaggaaacgcacactgccggtgtgatactatctcagtta 330
Query: 121 ttcatccaggtaccactgtttacagggacgcttttcctgagtacctaatgtatgttagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttcatccaggtaccactgtttacagggacgcttttcctgagtacctaatgtatgttagtc 270
Query: 181 cctgctcaggacatgaggaaacaagggacacatagcatttagcatcactcgacattccga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cctgctcaggacatgaggaaacaagggacacatagcatttagcatcactcgacattccga 210
Query: 241 aggtgaggc 249
|||||||||
Sbjct: 209 aggtgaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no367_i08.g1 MSMg01no367_i08.g1 CHROMAT_FILE:
MSMg01no367_i08.g1 PHD_FILE: MSMg01no367_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:43 2005
(485 letters)
>mm_chr15_59369289_59370172
Length = 884
Score = 891 bits (461), Expect = 0.0
Identities = 479/485 (98%), Gaps = 1/485 (0%)
Strand = Plus / Plus
Query: 1 aattcatctgcagtgttctttatctgcactactaaaatgctgttgtgtgacatttactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcatctgcagtgttctttatctgcactactaaaatgctgttgtgtgacatttactgg 260
Query: 61 ataatccagacagcacttgactaaatccacagtatggtgtcactgggtaaacacttgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataatccagacagcacttgactaaatccacagtatggtgtcactgggtaaacacttgaaa 320
Query: 121 atggaaatgtgtatctcttctggttttatcagttgagattaaaggtggtttatagcacag 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggaaatgtgtatcccttctggttttatcagttgagattaaaggtggtttatagcacag 380
Query: 181 gaaaccttttctccaccactctgtatctcagtgtgggccaataatctgtcacctgaaacc 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaccttttctccaccaccctgtatctcagtgtgggccaataatctgtcacctgaaacc 440
Query: 241 acttaaaatatttttgtgctttcttgactgtcctgttgctgtgatgacatcaggatctga 300
|||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acttaaaataggttgg-gctttcttgactgtcctgttgctgtgatgacatcaggatctga 499
Query: 301 ctgcagaggggagaaaagaacacttctctgacttgtttgcctccatgtcctttgtcccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgcagaggggagaaaagaacacttctctgacttgtttgcctccatgtcctttgtcccca 559
Query: 361 gttaaaagcactgcccttctttagcccttacttctgtctggttctcagatgttttctaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gttaaaagcactgcccttctttagcccttacttctgtctggttctcagatgttttctaca 619
Query: 421 ccgtctgtctctgtggagctcctagtctgctcacagttgtttctgtcaaggaaagctccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccgtctgtctctgtggagctcctagtctgctcacagttgtttctgtcaaggaaagctccg 679
Query: 481 tgtga 485
|||||
Sbjct: 680 tgtga 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 884
Length adjustment: 10
Effective length of query: 475
Effective length of database: 874
Effective search space: 415150
Effective search space used: 415150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
