Query= MSMg01no367_k09.b1 MSMg01no367_k09.b1 CHROMAT_FILE:
MSMg01no367_k09.b1 PHD_FILE: MSMg01no367_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:52 2005
(533 letters)
>mm_chr15_20594660_20595592
Length = 933
Score = 986 bits (510), Expect = 0.0
Identities = 519/522 (99%), Gaps = 1/522 (0%)
Strand = Plus / Plus
Query: 13 ggaattcttaggaataaagaagcatttttaaaactg-aaaaaaaagaaatatttatcctt 71
|||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 212 ggaattcttaggaataaagaagcatttttaaaactgaaaaaaaaaaaaagatttatcctt 271
Query: 72 ggatcatatttcaattttaaggcaaatttgtgaacaggttcttaaaattccatgacattt 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ggatcatatttcaattttaaggcaaatttgtgaacaggttcttaaaattccatgacattt 331
Query: 132 tatttatttattttttattattattttttctcagcacacctttattaggcactatgtcac 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tatttatttattttttattattattttttctcagcacacctttattaggcactatgtcac 391
Query: 192 agtgccgggagtgctagtttgcaacaagtgagattttcctagggttccacagggtagtcc 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 agtgccgggagtgctagtttgcaacaagtgagattttcctagggttccacagggtagtcc 451
Query: 252 ttttttaaggttactggggtactcatagacttgaaatgtcgctgtccatctaaatacaac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttttttaaggttactggggtactcatagacttgaaatgtcgctgtccatctaaatacaac 511
Query: 312 atggactctccatatgttttagggaaaatcaagggtacttctttttctgacatgaatgta 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atggactctccatatgttttagggaaaatcaagggtacttctttttctgacatgaatgta 571
Query: 372 aaatgaaagacattggtggtcatatgctcacgactgtcaagagagaacacttcactatgg 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aaatgaaagacattggtggtcatatgctcacgactgtcaagagagaacacttcactatgg 631
Query: 432 actctgacttgaatgtaattaccctgggtgaagcatacctgtgaagaaagaaagagcaat 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 actctgacttgaatgtaattaccctgggtgaagcatacctgtgaagaaagaaagagcaat 691
Query: 492 gaaccaacttcaacaggcttctgaaacatgatatcatctact 533
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gaaccaacttcaacaggcttctgaaacatgatatcatctact 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_k09.g1 MSMg01no367_k09.g1 CHROMAT_FILE:
MSMg01no367_k09.g1 PHD_FILE: MSMg01no367_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:52 2005
(516 letters)
>mm_chr15_20785533_20786448
Length = 916
Score = 768 bits (397), Expect = 0.0
Identities = 400/401 (99%)
Strand = Plus / Minus
Query: 1 tattcttcatctaagcaacaacactggtaaatgcactactaactgtgaaatttccctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tattcttcatctaagcaacaacactggtaaatgcactactaactgtgaaatttccctcaa 342
Query: 61 gcattcctccttccctactccaggaaacattacaataaaagtaaaatcaacagttttaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gcattcctccttccctactccaggaaacattacaataaaagtaaaatcaacagttttaat 282
Query: 121 aattattatgtgtaaaatactgcccaaacaacttaacattattggtgtattggcatgagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aattattatgtgtaaaatactgcccaaacaacttaacattattggtgtattggcatgagt 222
Query: 181 atttttaatttcaaacatgcttccttcattggggaccctatgctgaatccaatggattgc 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 221 atttttaatttcaaacatgcttccttcattggggaccctatgctcaatccaatggattgc 162
Query: 241 tctgggcacccatttctgtatttgtcagccactggcagatcctctcaggagagagctata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 tctgggcacccatttctgtatttgtcagccactggcagatcctctcaggagagagctata 102
Query: 301 ccaggctcctgtcagcaagcacttgttggcatccacaatattgtctgggtttggtgattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 ccaggctcctgtcagcaagcacttgttggcatccacaatattgtctgggtttggtgattg 42
Query: 361 tagaagggatggatccccaaatgagtcagtatctggaaggt 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 tagaagggatggatccccaaatgagtcagtatctggaaggt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
