Query= MSMg01no368_i22.b1 MSMg01no368_i22.b1 CHROMAT_FILE:
MSMg01no368_i22.b1 PHD_FILE: MSMg01no368_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:01 2005
(455 letters)
>mm_chr15_50442140_50442994
Length = 855
Score = 864 bits (447), Expect = 0.0
Identities = 450/451 (99%)
Strand = Plus / Minus
Query: 5 gaattcttctgagacttctctcttccagccagtttacttactattggcttttaaaatata 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gaattcttctgagacatctctcttccagccagtttacttactattggcttttaaaatata 596
Query: 65 gaaccatttctcttttaggcagccaactcgagccattttcatggagtaaattcaatgaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gaaccatttctcttttaggcagccaactcgagccattttcatggagtaaattcaatgaag 536
Query: 125 accccacttctcaacttgtaattcagatgtctgagagtcactggagtatttgcaaatatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 accccacttctcaacttgtaattcagatgtctgagagtcactggagtatttgcaaatatt 476
Query: 185 tagcacctgcacctcaatctttcatcttgcaaatcttatttttacttaagagtagcggct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tagcacctgcacctcaatctttcatcttgcaaatcttatttttacttaagagtagcggct 416
Query: 245 atgaccaagaacaacagtttacagtgttcagttgattaaacaaaaacattcatggaattc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atgaccaagaacaacagtttacagtgttcagttgattaaacaaaaacattcatggaattc 356
Query: 305 gagtggttccatctgaaccagacagtttagactgatgcctgtggaaaggatgtgggatca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gagtggttccatctgaaccagacagtttagactgatgcctgtggaaaggatgtgggatca 296
Query: 365 ctccagaattaatgtgaagtataggattttggcagtgggaaagccctctgaataccatca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ctccagaattaatgtgaagtataggattttggcagtgggaaagccctctgaataccatca 236
Query: 425 gtttgagatatttttttgaaagtatctaaat 455
|||||||||||||||||||||||||||||||
Sbjct: 235 gtttgagatatttttttgaaagtatctaaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_i22.g1 MSMg01no368_i22.g1 CHROMAT_FILE:
MSMg01no368_i22.g1 PHD_FILE: MSMg01no368_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:01 2005
(427 letters)
>mm_chr15_50277824_50278650
Length = 827
Score = 737 bits (381), Expect = 0.0
Identities = 422/447 (94%), Gaps = 20/447 (4%)
Strand = Plus / Plus
Query: 1 tacaggtcccattttgtgatgcttccatgatggctttcaattactccatatgctggagtg 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacaggtcccattctgtgatgcttccatgatggctttcaattactccatatgctggagtg 240
Query: 61 tgggcacccaaatgatagcaccagctaagtgatagctgtgagcatgggtatgcag---ac 117
||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 241 tgggcacccaagtgatagcaccagctaagtgatagctgtgagcatgagtatgcagaacac 300
Query: 118 c--------------ac---cttcagacagtgggaataaccatggacttttcatcttctc 160
| || ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 301 ctacaggaacaagcaacatgcttcagatagtgggaataaccatggacttttcatcttctc 360
Query: 161 tttcaaacattctgctagcatatcccattgtcacactgatcaaatctaaataggtaccag 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttcaaacattctgctagcatatcccattgtcacactgatcaaatctaaataggtaccag 420
Query: 221 ttgacacatgagtgtgaaaagtgtttattatgtagtcaaactctctgcaccatgagtgaa 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgacacatgagtgtgaaaagtgtttattatgtagtcaaactctctgcaccatgagtgaa 480
Query: 281 gtaggcaaagataattcagagagccaccatgtctaagtaggtcatttatattatgttaaa 340
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 481 gtaggcaaagataattcagagagccaccatgtctaagtaggtcatgtatattatgttaaa 540
Query: 341 acactagatggggttgagcaggaacatatgattagcatttaggaagtgataaaaaaaatt 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acactagatggggttgagcaggaacatatgattagcatttaggaagtgataaaaaaaatt 600
Query: 401 agtaaattcttcatactcaattttgaa 427
|||||||||||||||||||||||||||
Sbjct: 601 agtaaattcttcatactcaattttgaa 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
