Query= MSMg01no370_i05.b1 MSMg01no370_i05.b1 CHROMAT_FILE:
MSMg01no370_i05.b1 PHD_FILE: MSMg01no370_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:36 2005
(250 letters)
>mm_chr15_63895488_63896137
Length = 650
Score = 468 bits (242), Expect = e-136
Identities = 245/246 (99%)
Strand = Plus / Plus
Query: 5 gaattcatcagatagccaaggctaacatcgagctcctgatgcctctatcctttttacagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcagatagccaaggctaacatcgagctcctgatgcctctatcctttttacagg 264
Query: 65 tgtgtattgccacgcccatttttcattttcttttttacttgcatttttattaggaaggct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtgtattgccacgcccatttttcattttcttttttacttgcatttttattaggaaggct 324
Query: 125 ctgagggaaagtatttagtcatgttctacctctgttttcttcctgtgaaatgggctgacg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgagggaaagtatttagtcatgttctacctctgttttcttcctgtgaaatgggctgacg 384
Query: 185 gtgaggcccacagcaaggtattgtgggaggcagtagggtgatggaggtaaaatttcactt 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgaggcctacagcaaggtattgtgggaggcagtagggtgatggaggtaaaatttcactt 444
Query: 245 ggaaga 250
||||||
Sbjct: 445 ggaaga 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no370_i05.g1 MSMg01no370_i05.g1 CHROMAT_FILE:
MSMg01no370_i05.g1 PHD_FILE: MSMg01no370_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:36 2005
(319 letters)
>mm_chr15_64014745_64015464
Length = 720
Score = 511 bits (264), Expect = e-149
Identities = 306/320 (95%), Gaps = 1/320 (0%)
Strand = Plus / Minus
Query: 1 catgaagctctggcctacagtcactcctttgaccctttgcgctctccctttcatgccca- 59
||||||||||||||||| |||||||||||||||||||||| |||||| |||| || |||
Sbjct: 398 catgaagctctggcctaaagtcactcctttgaccctttgcactctccttttcttgtccat 339
Query: 60 ttttccattccctagattttctcattctcagccttattttggattcctggcagggaatgt 119
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttttctattacctagattttctcattctcagccttattttggattcctggcagggaatgt 279
Query: 120 agtctctgtctttgcctcagataaggctggtgccctcttcacacttgactgctgggagat 179
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 278 agtctctgtctttgcctcagataaggctggtgccctcttcacacttgaatgctgggagat 219
Query: 180 aatacagtcaagtcaggtccccttcctgtgggctgatgtcagcaacactaggcacaggtt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aatacagtcaagtcaggtccccttcctgtgggctgatgtcagcaacactaggcacaggtt 159
Query: 240 gtcgagaggaacttggttgttttaggccccacttgtgtgttcagggttggtgctttagct 299
|||||||||||| ||| ||||| |||||||||||||||||||||||| |||||||| |||
Sbjct: 158 gtcgagaggaacatggctgtttcaggccccacttgtgtgttcagggtcggtgctttggct 99
Query: 300 gtgcataccgtaccctaccc 319
||||||||||||||||||||
Sbjct: 98 gtgcataccgtaccctaccc 79
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
