Query= MSMg01no370_p05.b1 MSMg01no370_p05.b1 CHROMAT_FILE:
MSMg01no370_p05.b1 PHD_FILE: MSMg01no370_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:09 2005
(365 letters)
>mm_chr15_100330325_100331089
Length = 765
Score = 551 bits (285), Expect = e-161
Identities = 328/345 (95%), Gaps = 7/345 (2%)
Strand = Plus / Minus
Query: 17 gaattcaggcatttatcgcctgtaatcctagcacttggaggtagaagggtgagagaagtt 76
||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 692 gaattcaggcaggcat-gcctgtaatcctagcacttggaggtaggagggtgagagaagtt 634
Query: 77 cagtagaaggtagaaatagaaggtagaagaatacagccactgtcggaggccatcctttgc 136
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 633 cagtagaaggtagaaatagaaggtagaagaatacagccacttttggaggccatcctttgc 574
Query: 137 cccagggagaccctgcttcaaaaaacaaaacaaaacaaaacaacaaaagccgatgggatt 196
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 573 cccagggagaccctgcttcaa-----aaaacaaaacaaaacaacaaaagccgatgggatt 519
Query: 197 ttatgcttttgtgaccaatgatttatatttatattaaatagtttaacattcccattcata 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ttatgcttttgtgaccaatgatttatatttatattaaatagtttaacattcccattcata 459
Query: 257 agaggctatatgacaagcagaataggtagaatttagatctttcagaaaaataataattct 316
|||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||
Sbjct: 458 agaggctatatgacaagcagaatagggagaatttagagctttcagaaaaatgataattct 399
Query: 317 atcctatttgacttagtgttctctctctctctctctctctctttt 361
||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 398 atcctatttgatttagtgttctctctctctctctctctct-tttt 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_p05.g1 MSMg01no370_p05.g1 CHROMAT_FILE:
MSMg01no370_p05.g1 PHD_FILE: MSMg01no370_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:09 2005
(300 letters)
>mm_chr15_100191541_100192242
Length = 702
Score = 491 bits (254), Expect = e-143
Identities = 290/304 (95%), Gaps = 6/304 (1%)
Strand = Plus / Plus
Query: 1 tctgtttaatttcccatcttatctagcacatactttgctgaatatcattaccgtaggcag 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tctgtttaatttcccatcttatctagcacatactttgctgaatataattaccgtaggcag 260
Query: 61 tggaaggccactatagttagggaaatgggtacagtacatg--gggaaccctaaaagtaat 118
| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 261 tagaaggccactatagttagggaaatgggtacagt--atgtaggggaccctaaaagtaat 318
Query: 119 gcacgagagtagttaccaaggactcggggtgc--agggggagggattcttctgatcaaat 176
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 319 gcacgagagtagttaccaaggactcggggtgcggggggggagggattcttctggtcaaat 378
Query: 177 atcactggtcctgagtggttggtggcagagcctcaatcccagctctcaggtggcagaggt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atcactggtcctgagtggttggtggcagagcctcaatcccagctctcaggtggcagaggt 438
Query: 237 aggtggatctctgtgagtacagcctggtctactgatggagttccaggaccgtcagggcta 296
|||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||
Sbjct: 439 aggtggatctctgtgagtacagcctgatctacagatggagttccaggaccgccagggcta 498
Query: 297 caca 300
||||
Sbjct: 499 caca 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 702
Length adjustment: 9
Effective length of query: 291
Effective length of database: 693
Effective search space: 201663
Effective search space used: 201663
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
