Query= MSMg01no372_c02.b1 MSMg01no372_c02.b1 CHROMAT_FILE:
MSMg01no372_c02.b1 PHD_FILE: MSMg01no372_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:48 2005
(217 letters)
>mm_chr15_52808770_52809386
Length = 617
Score = 356 bits (184), Expect = e-103
Identities = 193/196 (98%)
Strand = Plus / Minus
Query: 1 gccttgggtttccagcagccactgtattcttgaaagccttgagcagaaccttcctgttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gccttgggtttccagcagccactgtattcttgaaagccttgagcagaaccttcctgttat 337
Query: 61 acagagagatattcagaaagcaccatggaaccattacccaaagggttttatttatactag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 acagagagatattcagaaagcaccatggaaccattacccaaagggttttatttatactag 277
Query: 121 gggagatatctctcttttggattttgtgttaaaacttggtattttgacctgttagattta 180
|| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ggaagatatctcactttttgattttgtgttaaaacttggtattttgacctgttagattta 217
Query: 181 agttgaattttgtctt 196
||||||||||||||||
Sbjct: 216 agttgaattttgtctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 617
Length adjustment: 9
Effective length of query: 208
Effective length of database: 608
Effective search space: 126464
Effective search space used: 126464
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no372_c02.g1 MSMg01no372_c02.g1 CHROMAT_FILE:
MSMg01no372_c02.g1 PHD_FILE: MSMg01no372_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:48 2005
(543 letters)
>mm_chr15_52617690_52618632
Length = 943
Score = 1015 bits (525), Expect = 0.0
Identities = 540/547 (98%), Gaps = 4/547 (0%)
Strand = Plus / Plus
Query: 1 aatggatttgcttcttagctggtggcatgtctgggtggaaactttcagagataaggcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 aatggatttgcttcttagctggtggcatgtctgggtggaaactttcagagataaggcctg 256
Query: 61 tataggggaagtaagtcatggagagtgtgggctcacgtaaatctgttgttttcagccccc 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 257 tataggggaagtaagtcatggagagtgtgggctcatgtaaatctgttgttttcagccccc 316
Query: 121 tttttggactccctttccagctgtcttgagataagcaactctggtcttgatgactcgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tttttggactccctttccagctgtcttgagataagcaactctggtcttgatgactcgttc 376
Query: 181 cttgccatgatttactgccctgcctcactccagacctaggaagagtaaaactaggtgatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cttgccatgatttactgccctgcctcactccagacctaggaagagtaaaactaggtgatc 436
Query: 241 atcagcttaagcctgtgaaatcatgagccaaaaacaaacaaacaaacaaa----taaaca 296
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 437 atcagcttaagcctgtgaaatcatgagccaaaaacaaacaaacaaacaaacaaataaaca 496
Query: 297 aacaaacaaaacctgtcttcaagttaattttgttaacacccatagaaaatgaactagtta 356
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aacaaacaaaacctctcttcaagttaattttgttaacacccatagaaaatgaactagtta 556
Query: 357 atataaggttcttcaaaattctagagaaagccaatcctacagactgtggcatcagttctt 416
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 557 atataaggttcttcaaaattctagagaaagccaatcctacagactgtggcatgagttctt 616
Query: 417 tcagagggcatcagtagcagaggtcaggggaaggggctggagaaatggctcagtgggtaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tcagagggcatcagtagcagaggtcaggggaaggggctggagaaatggctcagtgggtaa 676
Query: 477 gagcactggctactcttctggaagactcaggctcaattcttagcaccaatactgtcaggc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gagcactggctactcttctggaagactcaggctcaattcttagcaccaatactgtcaggc 736
Query: 537 acaacgg 543
|||||||
Sbjct: 737 acaacgg 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
