Query= MSMg01no372_g02.b1 MSMg01no372_g02.b1 CHROMAT_FILE:
MSMg01no372_g02.b1 PHD_FILE: MSMg01no372_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:07 2005
(576 letters)
>mm_chr15_8658605_8659579
Length = 975
Score = 1013 bits (524), Expect = 0.0
Identities = 559/572 (97%), Gaps = 4/572 (0%)
Strand = Plus / Plus
Query: 5 gaattctcctctttgccgttagagaggacaactagagcggaatagaaaggaaaaaaaaaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattctcctctttggtgttagagaggacaactagagcggaatagaaagg-aaaaaaaaa 263
Query: 65 gttatagcctcctgggctgagaaattgggacctgctcacaggatggcagacggtgagtta 124
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 264 gttatagcctcctgggctgagcaatcgggacctgctcacaggatggcagacggtgagtta 323
Query: 125 attgcacgagaattaaaagacggaagagctttggtagcaggccagattgtgtgcatttta 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 324 attgcacgagaattaaaagacggaagagctttggtagcaggccagattgtatgcatttta 383
Query: 185 ctggactatgtgtacaaaattaacgtaaagttagaatagatgagcaaaaagttgtgttcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctggactatgtgtacaaaattaacgtaaagttagaatagatgagcaaaaagttgtgttcc 443
Query: 245 ttttccagtttgctctatcccctcagtgagtaaggggttcttcagggttggatgagacca 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 444 ttttccagtttgctctatcccctcaatgagtaaggggttcttcagggttggatgagacca 503
Query: 305 agcacccacatttccactctgtcctcagagcctagccaagtgcctcgcacaacccacaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agcacccacatttccactctgtcctcagagcctagccaagtgcctcgcacaacccacaca 563
Query: 365 ctcattaagtgcctggttgaactaaacagaaaaattccacttgagaactcatgtcttgta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctcattaagtgcctggttgaactaaacagaaaaattccacttgagaactcatgtcttgta 623
Query: 425 tgaggttaaagatatataactatgtcaaaaaaaaaaaaagagctaactgagatactgaca 484
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 624 tgcggttaaagatatataactatgtcaaaaaaaaaa---gagctaactgagatactgaca 680
Query: 485 tgtagccattggcatatgtagcgtgagtctttggtttcatttattgacttcacaaagaaa 544
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtagccattggcatatgtagtgtgagtctttggtttcatttattgacttcacaaagaaa 740
Query: 545 gaaacatgagccaattaacttgcaaatacggc 576
|||||||||||||||||||||| |||||||||
Sbjct: 741 gaaacatgagccaattaacttgtaaatacggc 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 975
Length adjustment: 10
Effective length of query: 566
Effective length of database: 965
Effective search space: 546190
Effective search space used: 546190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_g02.g1 MSMg01no372_g02.g1 CHROMAT_FILE:
MSMg01no372_g02.g1 PHD_FILE: MSMg01no372_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:07 2005
(556 letters)
>mm_chr15_8687864_8688819
Length = 956
Score = 1004 bits (519), Expect = 0.0
Identities = 546/555 (98%), Gaps = 1/555 (0%)
Strand = Plus / Minus
Query: 1 tatgatggacagatagttcttattttacttgcttcttttgttggtttattcatttaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 767 tatgatggacagatagttcttattttacttgcttcttttgttggtttattcgtttaaaga 708
Query: 61 cacaactaaagcttttaaaaaagctatttgtcttacccaaccagaattttaaaagggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 cacaactaaagcttttaaaaaagctatttgtcttacccaaccagaattttaaaagggaat 648
Query: 121 gaggtttgtcttagtccatttttggctgtcactgaataccaaaggccaagtcattggtag 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gaggtttgtcttagttcatttttggctgtcactgaataccaaaggccaagtcattggtag 588
Query: 181 agaatagaggtttgtttcagttcatagttcccgagcctgggaaatccaagcagtattgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 agaatagaggtttgtttcagttcatagttcccgagcctgggaaatccaagcagtattgcg 528
Query: 241 tggcagctggtaagagtcttcttgccacaccacacagcatggcagagggtgtcacatggc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 527 tggcagctggtaagagtcttcttgccacaccacacagcatggcagagggtgtcacatgac 468
Query: 301 aagacggagcaagcatgccaactccagtctctctccctgtgatggctatttctggttgtc 360
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 467 aagatggagcaagcgtgccaactccagtctctctccctgtgatggctatttctggtcgtc 408
Query: 361 agcttgactacatctgaaatgaactacaatccagaaatggagggcacacctgtgatcccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 agcttgactacatctgaaatgaactacaatccagaaatggagggcacacctgtgatcccg 348
Query: 421 atcttgaggatggaagacacaggcttctgacctggatcttgacatggagatattgaggta 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 347 atcttgaggatggaagacacaggcttctgacctggatcttgacatggagatattgaggca 288
Query: 481 tagtggccatgaaaagtttaggcccaggcaaggtagtatacac-tttaatcccaggacat 539
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 287 tagtggccatgaaaagtttaggcccaggcaaggtagtatacacctttaatcccaggacat 228
Query: 540 tgaggctagcagatc 554
|||||| ||||||||
Sbjct: 227 tgaggcaagcagatc 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
