Query= MSMg01no372_j09.b1 MSMg01no372_j09.b1 CHROMAT_FILE:
MSMg01no372_j09.b1 PHD_FILE: MSMg01no372_j09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:22 2005
(420 letters)
>mm_chr15_101956643_101957462
Length = 820
Score = 723 bits (374), Expect = 0.0
Identities = 408/422 (96%), Gaps = 6/422 (1%)
Strand = Plus / Minus
Query: 1 tgcctctgtgttcccagcctggcctctttctccccagtgtgaccacctcacctcaaggca 60
|||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||
Sbjct: 619 tgcctctgtgttcccagcctggcctctttctctccagtttgactacctcacctcaaggca 560
Query: 61 ggcagttagtttcaaggtagcctgtgataggaaaacagaagcagtggggggtggaagtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggcagttagtttcaaggtagcctgtgataggaaaacagaagcagtggggggtggaagtgg 500
Query: 121 gtctgtggagttcagggtagaatgagttcacacgaggtggcagaaagtcagccctctgtg 180
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 499 gtctgtgaagttcagggtagaatgagttcacacaaggtggcagaaagtcagccctctgtg 440
Query: 181 ggctgtgttgatggctgcttccctgctggccctggggtgtcagggctgtgctggttggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ggctgtgttgatggctgcttccctgctggccctggggtgtcagggctgtgctggttggga 380
Query: 241 gccaagacct---tttatgcccctccttggctcttcactcctttctatcatcgttttttg 297
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gccaagacctcagt---tgcccctccttggctcttcactcctttctatcatcgttttttg 323
Query: 298 acaacatccactgagttgaacttgggcctgagccagggccatgttcctgttctcatctct 357
||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 322 acaacatccacagagttgaacttgggcctgagccagggccatgttccagctctcatctct 263
Query: 358 gacctctcctcactgttttcctggcatcctttccctgcctggacctgtccccgctctact 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gacctctcctcactgttttcctggcatcctttccctgcctggacctgtccccgctctact 203
Query: 418 cc 419
||
Sbjct: 202 cc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_j09.g1 MSMg01no372_j09.g1 CHROMAT_FILE:
MSMg01no372_j09.g1 PHD_FILE: MSMg01no372_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:22 2005
(426 letters)
>mm_chr15_101803980_101804805
Length = 826
Score = 801 bits (414), Expect = 0.0
Identities = 423/426 (99%)
Strand = Plus / Plus
Query: 1 aactgggggatagagggtcggagatgcgacccagactctgaagaagcaatgagccgctgc 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactgggggacagagggtcggagatgcgacccagactctgaagaagcaatgagccgctgc 260
Query: 61 tatctgtggaaacctggcttagggcgacccctacagggcaatcccagaatgcagggagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatctgtggaaacctggcttagggcgacccctacagggcaatcccagaatgcagggagac 320
Query: 121 tgggaaatagcctagctcctcccctctccccactggggttgctcgtggcatctcttcgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggaaatagcctagctcctcccctctccccactggggttgctcgtggcatctcttcgcc 380
Query: 181 tcccagcggttctaacgctgcctagcacccaggatctcccagatcctgagtcagcccaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcccagcggttctaacgctgcctagcacccaggatctcccagatcctgagtcagcccaga 440
Query: 241 atgtttccatttcgcccctccactaaataaccaagaccaagtgagtcaacgtggtcttcc 300
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagttaccatttcgcccctccactaaataaccaagaccaagtgagtcaacgtggtcttcc 500
Query: 301 caaaaagcgatgcaagagtatttgggagagttgggctctaagaaccatcattaaatattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaaaagcgatgcaagagtatttgggagagttgggctctaagaaccatcattaaatattc 560
Query: 361 caacatgagtatcagagcccaccttaggctcacgtggccacccggcagtgcagagtggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caacatgagtatcagagcccaccttaggctcacgtggccacccggcagtgcagagtggaa 620
Query: 421 agggat 426
||||||
Sbjct: 621 agggat 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
