Query= MSMg01no372_o01.b1 MSMg01no372_o01.b1 CHROMAT_FILE:
MSMg01no372_o01.b1 PHD_FILE: MSMg01no372_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:43 2005
(477 letters)
>mm_chr15_38267224_38268099
Length = 876
Score = 799 bits (413), Expect = 0.0
Identities = 457/477 (95%), Gaps = 10/477 (2%)
Strand = Plus / Plus
Query: 1 gatctgtgtgttggcaatttgagctttttctaggaggaggaggagaccgagccacctctt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 210 gatctgtgtgttggcaatttgagctttttctaggaggaagaggagaccgagccacctctt 269
Query: 61 aatctgtattgctataataaaaacccaaggccgggtggtttatagaaaacaattatctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 270 aatctgtattgctataataaaaacccaaggccgggtggtttatagaaaacaatcatctat 329
Query: 121 ttcttacagttctgggggatagaaagtccaatttcaaggtactcttgggttgagtcttcc 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 330 ttcttacagttctgggggatagaaagtccaatttcaagg---------gttgagtcttcc 380
Query: 181 tgcaagggctgctttctgcctctaggttggtacctggtagtgtgtcttctcctctagagg 240
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 381 tgcaagggctgctttctgcctctaggttggcacctggcagtgtgtcttctcctctagagg 440
Query: 241 gaagaaagttagggggaaagaatgtttaatacacaaagccatctttgatagtggactaat 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 gaagaaagccagggggaaagaatgtttaatacacaaagccatctttgatagtggaccaat 500
Query: 301 tctgttcacaatggaagccctctggtggctaaccccctcctaacagcacctcaaagttaa 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgttcacagtggaagccctctggtggctaaccccctcctaacagcacctcaaagttaa 560
Query: 361 gtcctagcaccagggtcaaacctagtatccttagcagcaggtgtgtggaagcctcaggct 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 gtcctagcaccagg-tcaaacctagtatccttagcagcaggtgtgtggaagcctcagact 619
Query: 421 ccgctgcttactgttcgagttggcagtgagacctgggagagtggagcagataaatga 477
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 620 ccgctgcttactgttcgagttggtagtgagacctgggagagtggagcagataaatga 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 876
Length adjustment: 10
Effective length of query: 467
Effective length of database: 866
Effective search space: 404422
Effective search space used: 404422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_o01.g1 MSMg01no372_o01.g1 CHROMAT_FILE:
MSMg01no372_o01.g1 PHD_FILE: MSMg01no372_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:43 2005
(560 letters)
>mm_chr15_38447059_38448018
Length = 960
Score = 1000 bits (517), Expect = 0.0
Identities = 517/517 (100%)
Strand = Plus / Minus
Query: 1 acaggtaataagtaggaaagggtgtttacataaaactgtaggttataaagataaatgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 acaggtaataagtaggaaagggtgtttacataaaactgtaggttataaagataaatgagt 458
Query: 61 aatcaatttatttctctaatgttttagtatgattcccaacaatgaactcagagtggtacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aatcaatttatttctctaatgttttagtatgattcccaacaatgaactcagagtggtacc 398
Query: 121 ttcaatttagattccgcagctaacattttactctacttaccttccagccatcttactaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttcaatttagattccgcagctaacattttactctacttaccttccagccatcttactaat 338
Query: 181 tctgcattacggacatcaaaatgcttcatagctctaacttgagtatttccatacattaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tctgcattacggacatcaaaatgcttcatagctctaacttgagtatttccatacattaaa 278
Query: 241 tacagtcccattctctaatttttagaaattggcagtaaaattctcattatttatttgtac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tacagtcccattctctaatttttagaaattggcagtaaaattctcattatttatttgtac 218
Query: 301 tgtttgattagattttgttgtttgtttgagacaggacctcactttgtagcccagacttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tgtttgattagattttgttgtttgtttgagacaggacctcactttgtagcccagacttga 158
Query: 361 gtctgattttccttcctcatcagcctggtgctaggactccaggctcaggacaagtttggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gtctgattttccttcctcatcagcctggtgctaggactccaggctcaggacaagtttggc 98
Query: 421 ttgtatttagtacgttttagcaaagtgatgccaggtgttgttacacctgtaatcccagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 ttgtatttagtacgttttagcaaagtgatgccaggtgttgttacacctgtaatcccagga 38
Query: 481 agttcttgaagctagctatggtcacataaagcaaaat 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 agttcttgaagctagctatggtcacataaagcaaaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space: 522500
Effective search space used: 522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
