Query= MSMg01no373_e13.b1 MSMg01no373_e13.b1 CHROMAT_FILE:
MSMg01no373_e13.b1 PHD_FILE: MSMg01no373_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:13 2005
(589 letters)
>mm_chr15_53135379_53136367
Length = 989
Score = 1108 bits (573), Expect = 0.0
Identities = 585/589 (99%)
Strand = Plus / Minus
Query: 1 tggtgcccatcttggggagttagaaaaagatgggtgctattattgtcattgcaaatgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 tggtgcccatcttggggagttagaaaaagatgggtgctattattgtcattgcaaatgctt 730
Query: 61 cccagccctgccaccacggttaagtcttggcatggcaaattgacccttaaatctaccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 cccagccctgccaccacggttaagtcttggcatggcaaattgacccttaaatctaccctt 670
Query: 121 gcaaaacttgaagcataagtcttgtgaataacagggcagtataaacgttgtcaaagtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gcaaaacttgaagcataagtcttgtgaataacagggcagtataaacgttgtcaaagtaaa 610
Query: 181 gcagcagaagtagccagtgctatgataatgtctttctgatttaatgagcacgtctgaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gcagcagaagtagccagtgctatgataatgtctttctgatttaatgagcacgtctgaaaa 550
Query: 241 ctaaccaacatttaactcgttttattcttactgagataggatctcggcatagttgcttgg 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ctaaccaacatttaactcgctttattcttactgagataggatctcggcatagttgcttgg 490
Query: 301 caattttagtaattggggaagtatgattgccattatttcaattactgttgacctgaccac 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 489 caattttagtaattggggaagtatgattgccattatttcaattactattgacctgaccac 430
Query: 361 tgtttttggtccggcacggatatctttgtttcagtgtgctttctatgctcagggctttct 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgtttttggtccggcccggatatctttgtttcagtgtgctttctatgctcagggctttct 370
Query: 421 ttgtgctttctatgaggcttggtatgcgcagtctgaagcaaggctctgtccatttgcctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttgtgctttctatgaggcttggtatgcgcagtctgaagcaaggctctgtccatttgcctt 310
Query: 481 cctgcccttggagagttcgatatgcctccagtagagcagtggcttttcctgtcaaaacca 540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cctgcccttggagagttcgctatgcctccagtagagcagtggcttttcctgtcaaaacca 250
Query: 541 ctggccatctagtgagtaccacagagcttcttctgtcctgcttcttcct 589
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctggccatctagtgagtaccacagagcttcttctgtcctgcttcttcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_e13.g1 MSMg01no373_e13.g1 CHROMAT_FILE:
MSMg01no373_e13.g1 PHD_FILE: MSMg01no373_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:13 2005
(517 letters)
>mm_chr15_52922769_52923684
Length = 916
Score = 946 bits (489), Expect = 0.0
Identities = 510/517 (98%), Gaps = 1/517 (0%)
Strand = Plus / Plus
Query: 1 cacatggtcctcccaacaagtccggtttacattaaatggttattcactgctgatgaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacatggtcctcccaacaagtccggtttacattaaatggttattcactgctgatgaatac 260
Query: 61 tttaggcccgaaacttcagtctcacttcgtgggtttcaaactaagtatgtacaatttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaggcccgaaacttcagtctcacttcgtgggtttcaaactaagtatgtacaatttaag 320
Query: 121 aagggtgaaggtgttttggagcacattcatatagaataggaccaccctgagtctttatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagggtgaaggtgttttggagcacattcatatagaataggaccaccctgagtctttatca 380
Query: 181 tagcagtctgaaagataccttactgccccacattttctaaacgctgtaactctgagctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcagtctgaaagataccttactgccccacattttctaaacgctgtaactctgagctaa 440
Query: 241 cgtgtcttctgatgccactgacgtgagagcgtctggggctccaactacggcaatgcctgc 300
|||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 441 cgtgtc-gctgatgccactgacatgagagcgtctggggctccaactatggcaatgcctgc 499
Query: 301 ggtaggaacatcagcctgtgtggagctgtatctctgtgctcccatccttcaccccactga 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggtaggaacatcagcctctgtggagctgtatctctgtgctcccatccttcaccccactga 559
Query: 361 gatcaagtcaaagctgcttgtgagtacagattctaccaaaccttcaaacatctagcctgg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gatcaagtcaaagctgcttgtgagtacagattctaccaaaccttcaaacatctagcctgc 619
Query: 421 cattagctctgtgtaggagagggccatactaaaccctgtaagaatgcatcaattcttcct 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 620 cattagctctgtgtaggagagggccatactaaaccctggaagaatgcatcaattcttcct 679
Query: 481 tgacacatcatcttagttatttcttatttctccttct 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgacacatcatcttagttatttcttatttctccttct 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 916
Length adjustment: 10
Effective length of query: 507
Effective length of database: 906
Effective search space: 459342
Effective search space used: 459342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
