Query= MSMg01no375_o15.b1 MSMg01no375_o15.b1 CHROMAT_FILE:
MSMg01no375_o15.b1 PHD_FILE: MSMg01no375_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:39 2005
(244 letters)
>mm_chr15_76069090_76069733
Length = 644
Score = 453 bits (234), Expect = e-132
Identities = 241/244 (98%), Gaps = 2/244 (0%)
Strand = Plus / Plus
Query: 1 ctcaaactcacagatctacctgcctctgctcttcttttctcacctgcctggaatgctggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcaaactcacagatctacctgcctctgctcttcttttctcacctgcctggaatgctggg 260
Query: 61 gagggcgtcctaaggctccccactccttggtactagcttgtttcttgtccatgttcatcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagggcgtcctaaggctccccactccttggtactagcttgtttcttgtccatgttcatcg 320
Query: 121 ttgccaaatttagcaagaatacaggaggagtagccactatgaatatatacaatacatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgccaaatttagcaagaatacaggaggagtagccactatgaatatatacaatacatata 380
Query: 181 tgtatgcatatttttctcccttagctacataccacacacacacacatacaatcacacaca 240
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 381 tgtatgcatatttttctcccttagctacataccacacacacacacacaca--cacacaca 438
Query: 241 caca 244
||||
Sbjct: 439 caca 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no375_o15.g1 MSMg01no375_o15.g1 CHROMAT_FILE:
MSMg01no375_o15.g1 PHD_FILE: MSMg01no375_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:39 2005
(475 letters)
>mm_chr15_76266505_76267379
Length = 875
Score = 911 bits (471), Expect = 0.0
Identities = 474/475 (99%)
Strand = Plus / Minus
Query: 1 actgagggaggggctaatttggctatccttggagccctgctggcctccagactagacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 actgagggaggggctaatttggctatccttggagccctgctggcctccagactagacatc 616
Query: 61 tatctggctgggtggttcaggctggatatggtacccagggcgtgtgatacacaggacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tatctggctgggtggttcaggctggatatggtacccagggcgtgtgatacacaggacagg 556
Query: 121 aaagagacattttagcccagtgttgcacttccaaatgcagtggacaaaatgcctcagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aaagagacattttagcccagtgttgcacttccaaatgcagtggacaaaatgcctcagcct 496
Query: 181 cctgggacccaagatggggcccatgctggaccatgaatgtggctctgagcagttgtcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cctgggacccaagatggggcccatgctggaccatgaatgtggctctgagcagttgtcagc 436
Query: 241 tctggttgggacactcacataaacaccagcaccatgccctccatctctagaaacccacga 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tctgggtgggacactcacataaacaccagcaccatgccctccatctctagaaacccacga 376
Query: 301 agtcttcactaaggaagctgggggcaggcggcagacagctgtacagccagatgcatctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agtcttcactaaggaagctgggggcaggcggcagacagctgtacagccagatgcatctca 316
Query: 361 aagtattcagagccctcttgggcatcctccaacacttcaccattgagcataccttgatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aagtattcagagccctcttgggcatcctccaacacttcaccattgagcataccttgatcc 256
Query: 421 tgcccagactgtggtaccccgaagcaggcaggtatgggagacatggcagtttgga 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgcccagactgtggtaccccgaagcaggcaggtatgggagacatggcagtttgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
