Query= MSMg01no376_h07.b1 MSMg01no376_h07.b1 CHROMAT_FILE:
MSMg01no376_h07.b1 PHD_FILE: MSMg01no376_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:21 2005
(480 letters)
>mm_chr15_56786131_56787010
Length = 880
Score = 886 bits (458), Expect = 0.0
Identities = 472/477 (98%), Gaps = 2/477 (0%)
Strand = Plus / Plus
Query: 5 gaattcctttctgacagtaaaactgcaaaaccttcagtcctcagattgatgtcatttact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttctgacagtaaaactgcaaaaccttcagtcctcagattgatgtcatttact 264
Query: 65 atttcagagaaagacaggtttttattgaatctctcacttgtatgcctgtatagacattct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttcagagaaagacaggtttttattgaatctctcacttgtatgcctgtatagacattct 324
Query: 125 gtgctaatttccataagccctgagatggctcttccctgggaagagggcagagggagagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgctaatttccataagccctgagatggctcttccctgggaagagggcagagggagagag 384
Query: 185 gtttccacacaggccagagtccttagtctgggccttgatgaacagagacagtctatggtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtttccacacaggccagagtccttagtctgggccttgatgaacagagacagtctatggtt 444
Query: 245 ttagagctttattgtagaaaggcagggaaaagagagaagataaaaggagagagacttgcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttagagctttattgtagaaaggcagggaaaagagagaagataaaaggagagagacttgcc 504
Query: 305 atggtcaagagaagaaaagggggaaagagaaagagagaagagaataagaaagatgaaagc 364
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 505 atggtcaagaggagaaaagggggaaagagaaagagagaaaagaataagaaagatgaaagc 564
Query: 365 ttaagagaaagagagagcttagagagtaagaggttagagagtaa-agaagtgaggagggg 423
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 565 ttaagagaaagagagagcttagagagtaagaggttagagagtaagaga-gtgaggagggg 623
Query: 424 ccnagcagcccctcttatagtgggcttgttatcttgctgttgctaggtaacttgaag 480
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccaagcagcccctcttatagtgggcttgttatcttgctgttgctaggtaacttgaag 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_h07.g1 MSMg01no376_h07.g1 CHROMAT_FILE:
MSMg01no376_h07.g1 PHD_FILE: MSMg01no376_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:21 2005
(519 letters)
>mm_chr15_56899400_56900318
Length = 919
Score = 801 bits (414), Expect = 0.0
Identities = 426/430 (99%)
Strand = Plus / Minus
Query: 1 ttgaaaaagccttgtgtatatctttcttactgcttgttttgaaactttaatgtgcattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttgaaaaagccttgtgtatatctttcttactgcttgttttgaaactttaatgtgcattac 371
Query: 61 tctgctttttgaatttacttgactcaacttttttttaaaccaaatcttcaccccttttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tctgctttttgaatttacttgactcaacttttttttaaaccaaatcttcaccccttttcc 311
Query: 121 ccagctctatctcacaccagggttttacaaaactgagtgaaatctgtgccaaaccaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ccagctctatctcacaccagggttttacaaaactgagtgaaatctgtgccaaaccaaact 251
Query: 181 tacccaatatacttaccaacccttgtctcagtccctgttcaggtgtcacctgccaaggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tacccaatatacttaccaacccttgtctcagtccctgttcaggtgtcacctgccaaggac 191
Query: 241 cagtcttggggcttggagaagggttcttgaagaaggggtgtctgggagtggcaaaaacaa 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cagtcttggggcttggagaagagttcttgaagaaggggtgtctgggagtggcaaaaacaa 131
Query: 301 acaactcaaagtcaaatcataggtccaaactggcggcttatgttctgttggagagttttc 360
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 130 acaactcaaagtcaaatcataggtccaaactggtggcttatgttctgctggagagttttc 71
Query: 361 cagcctgctttctctctgttctgctttcttttttttctgatctgctttctctggagacct 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 70 cagcctgctttctctctgttctgctttctttattttctgatctgctttctctggagacct 11
Query: 421 ctggagaaca 430
||||||||||
Sbjct: 10 ctggagaaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
