Query= MSMg01no377_d08.b1 MSMg01no377_d08.b1 CHROMAT_FILE:
MSMg01no377_d08.b1 PHD_FILE: MSMg01no377_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:18 2005
(361 letters)
>mm_chr15_81691825_81692585
Length = 761
Score = 659 bits (341), Expect = 0.0
Identities = 353/357 (98%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 5 ggaattcactttgtataccaggctggcctccaactcagaaatccacctgcctctgcctcc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcactttgtagaccaggctggcctccaactcagaaatccacctgcctctgcctcc 265
Query: 65 caagtgctgggattaaaggcatgcaccaccaccacctggctcatttttttttcttaagac 124
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 266 caagtgctgggattaaaggcgtgcaccaccaccacctggctcatttttttt-cttaagac 324
Query: 125 accaaaaggcagtattcaaagaaacaaatatttttagttctttgggtggccacttgggga 184
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 325 accaaaaggcagtattcaaagaaacaaatatttttagctctttgggtggccacttgggga 384
Query: 185 ttgggttaataaggaatcaagtatctgggtgttggaaataattttttttgaggggccagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgggttaataaggaatcaagtatctgggtgttggaaataattttttttgaggggccagg 444
Query: 245 aaaattacttctaggccaagaatcgttcacgtttatatcttagcctgaagctactattaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaaattacttctaggccaagaatcgttcacgtttatatcttagcctgaagctactattaa 504
Query: 305 aaagctacaggtcaaaatacattgtctgaagtttagccagttcagtttgactccctg 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaagctacaggtcaaaatacattgtctgaagtttagccagttcagtttgactccctg 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_d08.g1 MSMg01no377_d08.g1 CHROMAT_FILE:
MSMg01no377_d08.g1 PHD_FILE: MSMg01no377_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:19 2005
(404 letters)
>mm_chr15_81857044_81857847
Length = 804
Score = 623 bits (322), Expect = 0.0
Identities = 372/404 (92%), Gaps = 24/404 (5%)
Strand = Plus / Minus
Query: 1 aaggccagcacggggaacaaatatgaccaagtaccaggtaggcaggtctacacacaagac 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 aaggccagcacggggaacaaatatgaccaagtaccaggtacgcaggtctacacacaagac 322
Query: 61 tctgtcccaaacagtaataagaacaaacaagtggagaggtggaaaaaaggtaaaacgcgg 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 321 tctgtcccaaacagtaataagaacaaacaagtggagaggtggagaaaaggtaaaacgtgg 262
Query: 121 tcaagcatgatagtagacagctgaaaacccagcttagaatacacagcaagaccctgtctt 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaagcatgatagtagacatctgaaaacccagcttagaatacacagcaagaccctgtctt 202
Query: 181 taataaataaataaataaataaataaataaataaataaataaataaataaataaaatcta 240
| |||||||||||||||||||||||||||||||||||
Sbjct: 201 t------------------------aataaataaataaataaataaataaataaaatcta 166
Query: 241 acagggctggcaagatggctcgggggttaagagcactgactgctcttccgaaggtcctgg 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 165 acagggctggcaagatggctcgggggttaagagcactgactgttcttccgaagatcctgg 106
Query: 301 gttcaaatcccagcaaccacatggtggctcacaaccatttgtaatgaaatctgatgccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gttcaaatcccagcaaccacatggtggctcacaaccatttgtaatgaaatctgatgccct 46
Query: 361 cttctggtatgtttgaagacagctacagtgtacttacatataat 404
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 45 cttctggtgcgtttgaagacagctacagtgtacttacatataat 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
