Query= MSMg01no378_a18.b1 MSMg01no378_a18.b1 CHROMAT_FILE:
MSMg01no378_a18.b1 PHD_FILE: MSMg01no378_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:26 2005
(503 letters)
>mm_chr15_102426299_102427201
Length = 903
Score = 911 bits (471), Expect = 0.0
Identities = 492/499 (98%), Gaps = 1/499 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttaaatgtccagaaagattattcttactgttaagtaattaaattttcttgaa 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggaattctttaaatggggagaaagattattcttactgttaagtaattaaattttcttgaa 440
Query: 64 tgcagcaatgatagaaatgacaagggatagtagaataacaggatgatttaagtataacta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgcagcaatgatagaaatgacaagggatagtagaataacaggatgatttaagtataacta 380
Query: 124 ggcacttaagaaagacttcttccttccattgtgatttctgttttggtaaacatggtaaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggcacttaagaaagacttcttccttccattgtgatttctgttttggtaaacatggtaaaa 320
Query: 184 ataaaggcttacaaattgggacggaagcaggaaatcctattagtggctgccagtttaaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ataaaggcttacaaattgggacggaagcaggaaatcctattagtggctgccagtttaaca 260
Query: 244 ttcaagaccaatgggaagctcacttctgttagatttcaatgcttttcctcccaaagtctt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttcaagaccaatgggaagctcacttctgttagatttcaatgcttttcctcccaaagtctt 200
Query: 304 cctttcctttctttctttctttctttc-tttttttttaataaggcacaattttgttttca 362
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 199 ccttttctttctttctttctttctttcttttttttttaataaggcacaattttgttttca 140
Query: 363 tatcagattcttattaaagagtccaaattataatcatcctcactttttgaaaatctgaaa 422
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 tatcagattcttattagagagtccaaattataatcatcctcactttttgaaaatctgaaa 80
Query: 423 tttgtggcttgaggaaaaatgttcttgaactcactttctactcccctattaccataaaga 482
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 79 tttgtggcttgaggaaaaatgttcttaaactcactttctactcccctattaccataaaga 20
Query: 483 accctttctttcttctgat 501
|||||||||||||||||||
Sbjct: 19 accctttctttcttctgat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_a18.g1 MSMg01no378_a18.g1 CHROMAT_FILE:
MSMg01no378_a18.g1 PHD_FILE: MSMg01no378_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:26 2005
(403 letters)
>mm_chr15_102240644_102241446
Length = 803
Score = 756 bits (391), Expect = 0.0
Identities = 400/403 (99%)
Strand = Plus / Plus
Query: 1 ccagcacccatgtggtatctgacaactgtgactccagtccaaggagatccaactcctccc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagcacccatgtggtatctgacaactgtgactccagtccaaggagatccaactcctcct 260
Query: 61 tcttctagcctacttgtcattgtatgaatgtggcacacagtcatatatttaggtaataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttctagcctacttgtcattgtatgaatgtggcacacagtcatatatttaggtaataca 320
Query: 121 cataaaataaaaataaaatctaagataactagaatgtgaaaccaagactaggattgatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cataaaataaaaataaaatctaagataactagaatgtgaaaccaagactaggattgatgc 380
Query: 181 taagcagtaaaatgcttatttagcacgagtctagactgtggatccatgttcagcaccata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagcagtaaaatgcttatttagcacgagtctagactgtggatccatgttcagcaccata 440
Query: 241 tgagaaattattttttgagacagggtttttctgagtagctctcttgttctggaactaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagaaattattttttgagacagggtttttctgagtagctctcttgttctggaactaact 500
Query: 301 ctatagacctgcctgcctctgcctccccaatgctgggattaaaggcttgcaccaatgtgc 360
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 ctatagacctgcctgcctctgcctccccaatgctgggattttaggcttgcaccaatgtgc 560
Query: 361 tgtgcttttctttgtcctttaaggatcaggaggtttattttgg 403
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgcttttctttgtcctttaaggatcaggaggtttattttgg 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|